Gene Patl_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_4083 
Symbol 
ID4175872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4908063 
End bp4908635 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content46% 
IMG OID638057119 
Producthypothetical protein 
Protein accessionYP_663636 
Protein GI109900381 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCTT ACTTCAAAAG CAAAACAAAA CAGTTCATTG AATCTAAAAA CATGTATGCA 
GTGTTAGTCA TGGCTTCATT TTTAGAATCT ATTATCGTGC CGATCCCGCT AGAAGCAGTG 
CTCATTCCAT TGATGCAGGC CAAGCGTGAG AAAATTTGGT TGCTGGCAAC GCTTGCCACT 
GTGGGCTGCA TCTTCGGGGC GGTTATTGGC TACGGTGTTG GGTATTTCCT TTTCGACCAA 
TTCGCTGAAC AAATTGCCAG TTGGTTTTCT GATCCTCAGC AATTAGAGAA CGTAAAAGCG 
CAGATGCAAC AGCAGGGCTT CTGGTACGTA TTGTCCATCG GTATCATTCC CGTGCCATTT 
CAGATTGCGA TGCTAGCCGC TGGCGCAGTG AAATATCCCA TCGGCATGTT TCTGTTAGCC 
ACTTTAATTG CACGGTCGCT ACGCTATTTC GGATTAGCCT TGTTAGTGAA GCTAACGGGT 
AACCACGCTG AGGCGTTGTT TAAAAAATAT AAGCTCCCCA CAGCCATTGG CTTAACCATA 
TTGGTCGCCG TTATTTGGTG GATAAAACAC TAG
 
Protein sequence
MVAYFKSKTK QFIESKNMYA VLVMASFLES IIVPIPLEAV LIPLMQAKRE KIWLLATLAT 
VGCIFGAVIG YGVGYFLFDQ FAEQIASWFS DPQQLENVKA QMQQQGFWYV LSIGIIPVPF 
QIAMLAAGAV KYPIGMFLLA TLIARSLRYF GLALLVKLTG NHAEALFKKY KLPTAIGLTI 
LVAVIWWIKH