| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4077 |
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| Symbol | |
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| ID | 4175866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4901071 |
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| End bp | 4901787 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057113 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_663630 |
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| Protein GI | 109900375 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTATT ACCGTAATAT CGGCCAAATT AAGGCCATGA CGTTCGATCT CGATGACACC
CTTTACGACA ATTACCCTTA CATCATCCGC GCTGAACACG CCTTGATTGA GTTTTTGGGT
AGCTTTGCAG ATGACCCATC CCACAGCCAT CCAGCCTATT GGCGTGACCA TAGACGCGCC
ACATTAAAAC AAAAGCCTGA GCTTCACAGT GACATGGGCA TGTTGCGCCG AGAAGTGCTT
ACCAGCGGCA TTCAAGCATT CGGTCACAGC GGCCATGCGC TTAAGAGCGC GGTGGATGAA
GCCTTCGACT TTTTCTATTT TGAACGCAGC AATTTTCAAG TGAGTAGTGA AGTCACTGAT
ATTTTGAGCA AGCTAGGGGA GCGCTGGCCG TTAGTCGCTA TCACCAATGG CAATGTAAAC
TTAGAGCAAA TCGGTATCGC GGATTACTTT CAAAAGAGCT TTCATGCTAG TTTAGCGTTT
CCCATGAAGC CCAACAGCGC TATGTTCGAT GCAGCTAAGA AGCTGTTAAA CCTGCCCGGT
GAATCCATAT TGCATGTGGG GGATAACCTA GAAAAGGACG TTTTAGGTGC CAAGAAAGCC
GGATTCATGT GTGCCTGGTA TGCAGATAAT CGCCCGATGT CACTTAATAG CGAAGACGTT
ACCGTGTTAC CGGATATTCA ACTGCAACAT TTAAGCGAGC TGTGCGATAT AAACTAA
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| Protein sequence | MIYYRNIGQI KAMTFDLDDT LYDNYPYIIR AEHALIEFLG SFADDPSHSH PAYWRDHRRA
TLKQKPELHS DMGMLRREVL TSGIQAFGHS GHALKSAVDE AFDFFYFERS NFQVSSEVTD
ILSKLGERWP LVAITNGNVN LEQIGIADYF QKSFHASLAF PMKPNSAMFD AAKKLLNLPG
ESILHVGDNL EKDVLGAKKA GFMCAWYADN RPMSLNSEDV TVLPDIQLQH LSELCDIN
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