| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4072 |
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| Symbol | |
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| ID | 4175861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4895741 |
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| End bp | 4896817 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638057108 |
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| Product | hypothetical protein |
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| Protein accession | YP_663625 |
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| Protein GI | 109900370 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
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| TIGRFAM ID | [TIGR00661] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGATAT TGTACGGTGT ACAAGGCACC GGTAATGGAC ACACTACGCG CGCCCGAGTC
ATGGCAAAAG CCTTCAATCA GCGCAGCGAT ATTCAAGTCG ACTACCTATT TTCTGGTCGA
GACAAAGACA AATACTTTGA TATGGACGTC TTCGGCGACT TTGCCAGTTA TCGCGGCTTA
ACGTTTGAAA CCAAGGGTGG AAAAATCAGT AAGTCTGCGA CTTTCAAATC AGCCAAGTTG
CGTGAATTAC ACCAAGACAT CAAGAGCATT CGCGCTAGGG ATTACGATTT AGTGATCAAT
GATTTTGAGC CAATTAGCGC TTGGGCGGCC AAACTCAATA ACATCCCGTC TATATCTATC
AGTCATCAGG CGGCATTCAT GCACCCTGTG CCTCAACAGC CAGGCACCCT GTTCGATAAA
TTCATCACCC GCTACTTTGC CCCCACCGAT TTGCACCTAG GTGTGCACTG GTATCATTTT
GGCCATCCGA TCATGCCGCC TTTCATTGAA GCAGACGACA GCCAATCGCC ACCTTCGCGC
ACCTATCTGG TGTATTTGCC CTTTGAAGAA ATAGACGACA TTAATGCTTT GCTTGACCCT
TTCTCAGAGC ATGATTTTAT CTGCTTTCAC CCTAAAATAG AGCAAGACAA ACACCTAGGG
AATATTCAGT GGCGTCGCCC ATCTAAAGTC GATTTTGTGC GTATTTTACA AAGCTGCTCA
GGGGTGATAG CTAACGCGGG TTTCGAACTG GCCAGTGAAT GTCTCCATTT CGGCAAGAAA
CTGTTGATCA AACCTCTTAG CGGTCAATTT GAACAACTAT CCAATGCCAA AACCCTAGAA
CAACTCGGTT TAGCTCAAAG CATGCCGACG CTTGACAGCG ACATCGTAGA GGAATGGTTA
ACTAAGCCTG CTATCGAGCG TATCGCCTAC CCGCAAAACC CCGACATTCT TATTGATTGG
TTGGTCAAGC GTGACTGGCA AGCCGTTAAC ACGTTGTGCG AACAACTCTG GAGTAAAGTA
CGCTTCCCCC AGTCAGTCCT CACTCAGTTA GATAAACTGC CAAAAGCCAG TCGCTAA
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| Protein sequence | MKILYGVQGT GNGHTTRARV MAKAFNQRSD IQVDYLFSGR DKDKYFDMDV FGDFASYRGL
TFETKGGKIS KSATFKSAKL RELHQDIKSI RARDYDLVIN DFEPISAWAA KLNNIPSISI
SHQAAFMHPV PQQPGTLFDK FITRYFAPTD LHLGVHWYHF GHPIMPPFIE ADDSQSPPSR
TYLVYLPFEE IDDINALLDP FSEHDFICFH PKIEQDKHLG NIQWRRPSKV DFVRILQSCS
GVIANAGFEL ASECLHFGKK LLIKPLSGQF EQLSNAKTLE QLGLAQSMPT LDSDIVEEWL
TKPAIERIAY PQNPDILIDW LVKRDWQAVN TLCEQLWSKV RFPQSVLTQL DKLPKASR
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