| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4059 |
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| Symbol | |
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| ID | 4175848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4882440 |
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| End bp | 4883291 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057095 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_663612 |
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| Protein GI | 109900357 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.987315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA CCATTTTTGG TGGCGGTTGG TTAGGCCAGC CGCTCGCTGT CGCGCTAAGC
AAAAATTCTG CAAATGCCAA CGAAACTGCT CCTGAGGTTC AAGTCACCTG TCGCAGCGAA
GCATCCATGG CAACCATCCG CGCCCAAGGA CTGCAAGCCC GTCAGTTTAT TCTAGGCGGC
TCTTTACAAG ATAAAGCTGC CGGCAGCCCT CTACTGCATA GTGATATAGT CGTAATAAAC
ATTCCTCCTG GGCGCAGAAA TCTAGCGAAC AATCCACAAG CCAGCGAACA GTTTGTCAGC
GACATGTCTG CCCTCATCCG TCAAACCTGC ATTGAACAAA GCGCTAAGCT TATTTTCATT
AGCACCAGTG CTGTTTACGG CGATGTTGAA GGGGAAATAA CGGAAAACAG CCAGCTAAAC
CCGAGTACTG AATCGGCGCG CGCCCATTGC GCGATAGAGC AATTTATACA ACAAAACATA
CCTCAAGCCG CGACTATATT ACGCCTAGCA GGATTGGTTG GCCCAAAACG GCATCCAGCC
AAGTTTTTAG CGGGTAAATT AGATTTAAGC GGAGCAAGCC AAGTAGTAAA TCTGGTCCAT
CAGCAGGACG TGATCCACGC TATTGAGCAC ATCATTAATC GTGAGATATG GGGAGAGATA
CTGCATCTGT CAGCGCAAGC ACACCCCACC CGAAAAGAGT ATTACAGCTG GGCTTCAAAG
CAGCTAGCGC TAACACCACC GGTGTTTTCA GAGGAACAAA AAGCATGCTC AGGAAAGCGA
CTCAACCCAG AATATACTCT GCGAAAACTC GATATGCAGC TGAACTATCC TAGTCCTTAC
GACATGCTAT AA
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| Protein sequence | MKITIFGGGW LGQPLAVALS KNSANANETA PEVQVTCRSE ASMATIRAQG LQARQFILGG
SLQDKAAGSP LLHSDIVVIN IPPGRRNLAN NPQASEQFVS DMSALIRQTC IEQSAKLIFI
STSAVYGDVE GEITENSQLN PSTESARAHC AIEQFIQQNI PQAATILRLA GLVGPKRHPA
KFLAGKLDLS GASQVVNLVH QQDVIHAIEH IINREIWGEI LHLSAQAHPT RKEYYSWASK
QLALTPPVFS EEQKACSGKR LNPEYTLRKL DMQLNYPSPY DML
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