| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4032 |
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| Symbol | |
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| ID | 4175821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4855663 |
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| End bp | 4856790 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638057068 |
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| Product | stearoyl-CoA 9-desaturase |
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| Protein accession | YP_663585 |
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| Protein GI | 109900330 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1398] Fatty-acid desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0694156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAC CCCGTTTAAT TCTCACTAAT GTTTTAGTCT TTGTGATTAC TGGACTAGTC
GCACTCTTTC TTGTGCCTTA CGTTGCTCTA ACCCAAGGGT TTGATGGCGC AGAGATCGCT
GCGTGTATTA TTCTTATTTA CTTCTCAGGG ATGTCTATCA CCGCTGGATA CCACAGGCTG
TGGGCGCATA AAGCCTATGA AGCGAATACC TTTGTCAGAG TCGTACTGGC TATTGGCGGA
GCAATGGCCC TTCAAAACAG CATATTACAT TGGGTTTCTG ATCACAGGAT CCACCACAGG
CATGTGGACG ACAACGATAA AGACCCGTAT TCGGCCAAGC GTGGCTTTTG GTATTCACAC
ATGGGTTGGA TGCTTCGCGA ATATCAGATA CACCGCTATT CTGATTATAG TAATTGTAAA
GACCTTCAAA AAGACAAGGT CGTTGTATGG CAGCATAAGT ACTACCTTCC CATCATGCTT
ATTTCTAACT TTGGCATTCC AATGGCATTA GGTTGGTTGA ATGGTGATGT GCTTGGTATG
GTGTTGCTTG CTGGTTTTTT CCGCCTAGTG GTTGTCCATC ATGTGACGTT TTTTATTAAT
TCTCTTGCCC ATATTTGGGG ACGTCAACCT TATACAGATA AAAATACAGC CCGCGATAAT
GACATTTTAG CTTTTTTCAC TTTTGGTGAG GGGTACCATA ATTACCACCA CATATTTGAA
TATGATTACC GCAATGGCAT TAAATGGTGG CAGTTTGATC CAACTAAATG GCTAATACGA
GGGCTGTCGT TTATAGGCTG GACCAAAAAC TTACGCCGCT GCCCAGAAGA ACGTATTGAG
AAAGCGAAGA TGGCGATGCA ATTGCAGCGC GCACAACAGA AGTTATCTGT GCTTCCAAAT
GCCGATGAGA TATTACATAG TTTACAGCAG GAATATGATG CAATCTTGCA TAAAATGGGC
GAAATGTACG CCACTAAAAA ACGCTTAATG GAAATTCGCA AACATAAATT GAAGCGTAAT
TACGAGAAAC TAGAACTAGA TTTTAAATAC CGCGAACTCA AATACAATTT AGAGTTACGA
AAGCAAAAAT GGCTGCAGCT GTATCAAGTA AAATATCAAA TGGCTTAG
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| Protein sequence | MEKPRLILTN VLVFVITGLV ALFLVPYVAL TQGFDGAEIA ACIILIYFSG MSITAGYHRL
WAHKAYEANT FVRVVLAIGG AMALQNSILH WVSDHRIHHR HVDDNDKDPY SAKRGFWYSH
MGWMLREYQI HRYSDYSNCK DLQKDKVVVW QHKYYLPIML ISNFGIPMAL GWLNGDVLGM
VLLAGFFRLV VVHHVTFFIN SLAHIWGRQP YTDKNTARDN DILAFFTFGE GYHNYHHIFE
YDYRNGIKWW QFDPTKWLIR GLSFIGWTKN LRRCPEERIE KAKMAMQLQR AQQKLSVLPN
ADEILHSLQQ EYDAILHKMG EMYATKKRLM EIRKHKLKRN YEKLELDFKY RELKYNLELR
KQKWLQLYQV KYQMA
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