| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4019 |
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| Symbol | |
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| ID | 4175808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4842712 |
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| End bp | 4844049 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057055 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_663572 |
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| Protein GI | 109900317 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCGG CATTGTCGAG TGCCAATCCT ACTTATGCAC TCCTGCGGCT CCAAGATATA
ATAAAAAAGG AATATAGAAT TTTGAGATAT ATGTTTTTCG CGCTGGCCTT ATACAGCGCA
ATGGGCTTTG CTCAGCAGAC GGCGCAAAAT CTTTTTAGCC ATTACCAAAG TGCACTATAT
CAAATTCGAA TTATTGAATT GGGTTCAGGT AACAAGTCTT CAATTGGCTC TGGGTTTCAA
ATAAATGACT CAGGTGTGCT GGTAACGAAT TACCACGTTG TCTCTGAATT CGTTTATTTT
CCTGAAAAAT ATCGTATTGA GTATCTCGCT GCTGATGGCT CTGTTGGTGA TTTGTCGCTG
GTTAACATTG ATGTGGTTAA TGATCTTGCG TTAGTGCAGG TCAAAAGTGG AAGTAGCAGC
GCGGGTTTCT TCTCATTATC TGCCTCATTA CCCGAGCAGG GTAGCAGCAT ATACTCACTT
GGTAACCCGC ATGACTTAGG CATGATTGTG GTACCAGGTA CCTTTAATGG CATTAAAAAG
AACAGTTTCT ATCAGCGTAT TCATTTCACT GGCTCGATTA ACCCAGGCAT GAGCGGCGGT
CCTGTTGTGA ACCCTGAAGG CCAAGTTGTT GGTGTCAATG TCGCAACAGC GGGTAACCAA
ATCGGCTTTC TAGTGCCCTT GACTAAAATC CACACATTAA TTGACGCAGA CGATTTCACC
CCGTTAGCGC CAGACGATTA CAAGAAGGTT ATTGCCTCTC AGCTAATGGT GAATCAACAA
CGTTTGTTTG AACGCCTTGA ACGGGGTGTA TGGAAATCAA ATGAATTAGG CGGCGCGAAA
ATACCTACCC TAGAAGGCGC ATTACTTTCT TGTTGGGGAG ACTCAAACAG CGCGGATCAA
GAAGCGTTAT ATTTGTCAGT AGAAAATAGA TGCAGTTTAG ATGAAGAAAT ATTCCTTCAT
GGCGGTCTTC GTACTGGCGG TATAGAAATA GAGTTTGAAT GGCTTGAAAG TGGCGAATTT
GGTGCACACC GCTTTTATGA CTTCTTTAGT GGCAGCATTT CAGGTGCTGG TGCGGGTAAT
CAAGCTAGCA AAAATGATGT GAGCAACTAT CAATGCAAAC AGGATATTGT AGCCAATACT
CACGATGTTA AAACCAAAAG TATTTTATGT TTAAGGGCAT ATAAAGAATT CGCACATTTG
TACGATGTTT TATATATAGG AGCCACATTG AACCACGAGT CTCAAGGGTT GATAAGCCAC
TTTACCCTAG CTGGGGTGAG TCAGGAATCG GCTACGCGGT TTACTAAGCA ATTTGTGGGA
GCAATAGCAT GGCAATAG
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| Protein sequence | MSSALSSANP TYALLRLQDI IKKEYRILRY MFFALALYSA MGFAQQTAQN LFSHYQSALY
QIRIIELGSG NKSSIGSGFQ INDSGVLVTN YHVVSEFVYF PEKYRIEYLA ADGSVGDLSL
VNIDVVNDLA LVQVKSGSSS AGFFSLSASL PEQGSSIYSL GNPHDLGMIV VPGTFNGIKK
NSFYQRIHFT GSINPGMSGG PVVNPEGQVV GVNVATAGNQ IGFLVPLTKI HTLIDADDFT
PLAPDDYKKV IASQLMVNQQ RLFERLERGV WKSNELGGAK IPTLEGALLS CWGDSNSADQ
EALYLSVENR CSLDEEIFLH GGLRTGGIEI EFEWLESGEF GAHRFYDFFS GSISGAGAGN
QASKNDVSNY QCKQDIVANT HDVKTKSILC LRAYKEFAHL YDVLYIGATL NHESQGLISH
FTLAGVSQES ATRFTKQFVG AIAWQ
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