| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4014 |
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| Symbol | |
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| ID | 4175798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4831158 |
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| End bp | 4832102 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057045 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_663567 |
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| Protein GI | 109900312 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.548061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAATT CTCATCTACA GCCTTCCTTG AAACAGCTGA AGTACTTTGT CGCAGTCGCC
CACACACTGA ATTTTAGACG AGCGTCTTAT CAATTGCATA TCAGTCAACC CACATTGACG
AATCAGATCG TTAAGCTCGA AGAAAGTTTA GGGCTAACCC TGTTTGAACG ATCACGAAAT
GGCACTATGC TCTCGCCCGA TGGTCGTGAG CTGTTAAATC ACGCAGAGCA TATTCTGCAA
ACGATGACAG AGTTCCAAAG TGTTGCTAGA GAGCTCGCTC AAGGTCCCAA AACGACCTTC
AAACTAGGCA TTCCTCCCAC TTTAGGGCCT TATTTATTAC CCTTCGTGTT ACCGCAATTG
CATCAGCTAT ACGACAAATT AAAATTCTAT GTAAGAGAAT CAGCCCCTAG CGAATTGCAC
ACAGGTTTAT ATAAGGGGGA TTACGACTTA ATTATTTCTC CCCTTGCAGG CATGCCAAAC
GACTTCATCG TGGAGCCTTT ATTTACAGAG CCGCTAAAAC TAGTGCTTTC GAGTGAGCAC
CCCATGAGCA AGGATGTACT TATTGAACCC AAGCATCTGC GAGGACAGAG GATCTTAACG
CTTGAAGATA AACATCACTT TCATCATCAG GTATTAGATA TTTGCAATGA ATTGGGTGCA
GAGCTTCAAC GTGATTATGA AGGAACCAGT CTAGATACCC TAAGGCAAAT GGTGGTTATG
GGTATGGGGG CAGCTTTTCT ACCGGGTTTG TATGTACACT CAGAAATGCA CGTACCTGAA
TCACTTCACG TATGTGAAAT AAAAAACAAG CCTATTTTAC GCCAACACGC CCTCGCTTGG
CGAAACACTT CACCGTCACG AGTGTTCTTT CGAGAACTTG CTGATCGTTT CAGACGGATC
ATAAAAGCCC GACTGAGCCA CGTGGTTGAG GTTCATACTC TCTGA
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| Protein sequence | MPNSHLQPSL KQLKYFVAVA HTLNFRRASY QLHISQPTLT NQIVKLEESL GLTLFERSRN
GTMLSPDGRE LLNHAEHILQ TMTEFQSVAR ELAQGPKTTF KLGIPPTLGP YLLPFVLPQL
HQLYDKLKFY VRESAPSELH TGLYKGDYDL IISPLAGMPN DFIVEPLFTE PLKLVLSSEH
PMSKDVLIEP KHLRGQRILT LEDKHHFHHQ VLDICNELGA ELQRDYEGTS LDTLRQMVVM
GMGAAFLPGL YVHSEMHVPE SLHVCEIKNK PILRQHALAW RNTSPSRVFF RELADRFRRI
IKARLSHVVE VHTL
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