| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3997 |
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| Symbol | |
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| ID | 4175781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4811511 |
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| End bp | 4812251 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638057029 |
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| Product | Baf family transcriptional activator |
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| Protein accession | YP_663551 |
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| Protein GI | 109900296 |
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| COG category | [K] Transcription |
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| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
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| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000868707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAGC AAGCTAACGC GCTTTTATTA GATATAGGCA ACAGCTTTAT TAAAAGCGCT
CACGTCAAAA TCAGTGAGCG GGTATTTGAG CAGCCGCTTA TTGTCACTCG GTGCAATGAG
GTGAGCAAAC TTCGCGAGCA GATTAAAGCA AGTCAGCGGG TCGTTGCTGC AGCCGTCGGT
CAGGGTCAAC AAGTCAAATT ACTGGAATCG CTGTGCGCCG AGCTTCATGT GCCTCTGATC
TTAGCTAAAT CTCAAGCTCA GGCTTTTTCG ATGCGGTGTG CATATCGCAA TTTTTCGACA
TTAGGGGTGG ACCGATGGCT AGCGGTAATT GCAGCGCGGC GAATAAGTAA CACAGATGCG
TATTGTGTTA TTGACTTAGG CACCGCAAAT ACCTGCGATG TAGTGATTGG GCATCAACAT
CTAGGTGGCT GGATTGCTCC TGGTTTTAGC TTAATGCGCG ATAGCCTGAT TAAAAATACT
GAATTGGTGT TCGCCAACGA TGACTTTCCA AATGATTTAA CCCTAGGTGA GCAAACAGTC
GATTGTGTGA ATATGGGGTG TGCCGCAGCC GTAAATGGAT TTATTTACGC CGCTGAACAA
AAAATGCGTG AGAGAAAAAG CGAATATACA GTGATCATCA CAGGTGGTGG CCAAGAGCTA
ATCAAAAAAA ACGCACCTAA ACATTACTAT TTTCATAAAA ATTTAGTTTT ATTGGGCTTA
CTCGAATATT TATTTACCTA A
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| Protein sequence | MSEQANALLL DIGNSFIKSA HVKISERVFE QPLIVTRCNE VSKLREQIKA SQRVVAAAVG
QGQQVKLLES LCAELHVPLI LAKSQAQAFS MRCAYRNFST LGVDRWLAVI AARRISNTDA
YCVIDLGTAN TCDVVIGHQH LGGWIAPGFS LMRDSLIKNT ELVFANDDFP NDLTLGEQTV
DCVNMGCAAA VNGFIYAAEQ KMRERKSEYT VIITGGGQEL IKKNAPKHYY FHKNLVLLGL
LEYLFT
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