| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3990 |
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| Symbol | |
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| ID | 4175770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4801972 |
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| End bp | 4803729 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057018 |
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| Product | OmpA/MotB |
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| Protein accession | YP_663544 |
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| Protein GI | 109900289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACTC AGGGAAGTAG TAACGAGTCT GAACACGACC CGCAACTTCA AGAGCTGCGG
AGAATTCTGT TTGGTAGAGA TAATCAACAC ATCACCCAAG CCCTTCGTCA AAATGCTAGA
ACGATTGTCA GTGAGGTCTT TTCAGAAGCC TTCAAAGATC GCCAAGACAA AGACGGTAGT
GTAAAAAAAG TGATGGCGCC GTTAGTCGAC AAATCAGTAG AATACTCTGT CTCCAATCGT
AAAGAGCAAT TTGTCGGTTA TCTGTACCCC ATAGTTGGCA GTGTAGTAAG AAAATCCGTT
ACGGCATTTT TGACCGAGTT TATCGAACGA ACCAACCAAC TACTTGAAAA CAGTCTAACC
ATCAAAGGGC TCACATGGCG CTTCCAAGCT CGGCAAGCAG GGATACCCTA CGCCACTTAT
ATTGCCAGTC AAACATTTAA CTACCGTGTT GAGCAGGTCT TTTTAATCCA TAGGGAAACT
GGTTTACTGC TTAATACCCT TGCCTACAAC CAGCAATCGT CTGCTGATGC AGACTTGATA
TCGTCCATGC TAACGGCCAT TAATGATTTC GTTTCAGACT CCTTCAGGCC AAATAAAGAC
GGTCAAGAGC AAGGCTTAGA TATTGTCAAA ACCGACGATT TCACCTTAGT TCTCAAAGCA
GGACCAAGTG CCATTTTAGT TGCTGCGGTA ACGGGAAATA TGCCGCAAAG AGTAGCGAAC
CAATTACAGC AAACGATTGA AGAAATTCAC ACGCTATATG AGCCTCAGTT GAGGGAATTC
AAGGGCGACG CGTCAGCCTT TGCCGATTGC GACCAACAAC TTGCTGACTG CTTGGTCTCT
GAGTTAAAAG ACAGCGAGAA AGCAAAAGAG TCAAAACCTT GGATGGCATG GGGGATATTA
CTTTTTATCG CGATTGGGGC TGGCTATTAC AGTTACAAAC TGTGGCAAAT ACAAAACTAC
GTACAGAAAA TATCTAGTAT CAATCAAGAG GCTGGGATCA TGCTCGTACA GGCCCAACGG
AACGGCATTA AAGACATATC AATAGATATA CTTCGAGACC CTAACGCCGA AAAAATCAAC
AGTTGGTTGG CTGAGCAAAA TATTCCACAG GAGATGGTGC GTGTGACTGA AAAGCCTTAT
CTGTCTCTTG AAGAGCCCAT CATACAAAGT CGCCTTAGTA ACGTATTGGT GCAATATCCG
AGCTTAACTT TAGCGAACAA TTCAATCAGT GGTGAGCTTG ATCAACAGCA GTATTTTGAC
TTACGAAATC GTGTTCAGCA GTTGCCGGGG ATGCTGGATA GCGAGAGTGT GCTAGGGCAA
ATTAGTGTTA CCGACCCACT CACGCTACAA ATGGATGACG TTGAAAGCAT CCAGACGCTT
ATCGACCTCA AAATTAACCA GTTTAACGGC GCTTCGATTG AGTTTGCCAT CAATAGCTCA
CAACTGACAC CTGAAGCGAA AGATGGTATC AGCACTGTCG CAGAGATTGG TAAAACACTA
TTGAATCTTG CCAAGCAAAC AGAGCAAGAG ATGAGCTTCA TCGTTATTGG CGCCAGTGAC
GCACAAGGTT CACGGTCCTA TAATGAAGTG TTGAGTATTA AACGTGCCCA GACAGTAAAA
AATGCATTGC AGATGCGTGG GATCCCAGCC GATAAGTTAA ATGCTATCGG TATTGGCATT
GTTGACGTGC CCGCAGCAGG CAATGGTGCT CGTAAGGTGC TGTTTAATGT TATAAAAACT
CATGCAACAC AGCCGTAA
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| Protein sequence | MSTQGSSNES EHDPQLQELR RILFGRDNQH ITQALRQNAR TIVSEVFSEA FKDRQDKDGS
VKKVMAPLVD KSVEYSVSNR KEQFVGYLYP IVGSVVRKSV TAFLTEFIER TNQLLENSLT
IKGLTWRFQA RQAGIPYATY IASQTFNYRV EQVFLIHRET GLLLNTLAYN QQSSADADLI
SSMLTAINDF VSDSFRPNKD GQEQGLDIVK TDDFTLVLKA GPSAILVAAV TGNMPQRVAN
QLQQTIEEIH TLYEPQLREF KGDASAFADC DQQLADCLVS ELKDSEKAKE SKPWMAWGIL
LFIAIGAGYY SYKLWQIQNY VQKISSINQE AGIMLVQAQR NGIKDISIDI LRDPNAEKIN
SWLAEQNIPQ EMVRVTEKPY LSLEEPIIQS RLSNVLVQYP SLTLANNSIS GELDQQQYFD
LRNRVQQLPG MLDSESVLGQ ISVTDPLTLQ MDDVESIQTL IDLKINQFNG ASIEFAINSS
QLTPEAKDGI STVAEIGKTL LNLAKQTEQE MSFIVIGASD AQGSRSYNEV LSIKRAQTVK
NALQMRGIPA DKLNAIGIGI VDVPAAGNGA RKVLFNVIKT HATQP
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