| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3966 |
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| Symbol | |
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| ID | 4175746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4776657 |
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| End bp | 4777673 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638056994 |
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| Product | threonine dehydratase |
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| Protein accession | YP_663520 |
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| Protein GI | 109900265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.486699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAGTG TGAACTTTGC TGATATCAGT GCGGCTAGAT TACGTATCTC GCGTTATGTG
CGTACGAGTG AACTGATGAC ATCTGCATTA CTCAATCGTT GGCTGGGGCA CGAGATTTTG
TTCAAAACTG AATGCTTACA GCGCACTGGT GCTTTTAAGT TGCGCGGCGC ATTGAATACC
CTGCTGCATG CGAAAGAGAA AGGTGTTCCC ATTAAACGAG TGGTAGCTAG CAGTTCGGGC
AATCACGCCC AAGCGGTGGC TTATGCTGCA TCTTTGTTTG ATATTCCTGC GACTATTTTT
AGCGCACAAA ACATCTCAAA AATTAAAGCC GCTGCCACTC GCGCTTATGG GGCTGAGTTG
CGCTTATTCC CCTTACGAGA TGAAGCGGAC AATGCCGTGG CGCAAGCCGC AAATGAGCCC
GGCACGTTGT GGATCCCGCC TTTTAACCAC CCAGATGTCA TTGCGGGGCA GGGTACAGTA
ACGGCTGAAA TTCTAGAGCA AACCGCTGAC GTGAATGGCA TATTCATGCC TTGTGGCGGA
GGTGGTTTAG CCTCAGGTAG CATGCTAGCC GCACGCGCGT TAAGCCCACA AACTAAAGTC
ATCGCGAGTG AGCCACTGGC GGGTAACGAT GCAGCGCAAT CTTTGCGCTT GGGCAGTATT
CAGCGCTTAA TAACACCGGC TAAAACACTC GCGGATGGCG CCGCAACGCC AGTGGTAGGC
GAACATACCT ATCCACTAAT ACAACAGCTA GACGGTTTTT ACGAGGTGGA TGAAACGCAA
ATCGCCTACT GGACGCAGTG GCTACAGCAT TTATTAAAGT TGCATGTTGA GCCCACAAGC
GCCATGAGTA TGCATGGTGT GGTCAACTAT TTGGCCAAGC AAAGCGCACC GCAAAAAGTG
GTGGTGATTT TGTCTGGGGG AAATATCGAT GCACAAAAAA TGCAGCAGAT TTGGCAACAA
GACCATTTAA TCAATCAACC AAGTTTACCC AGTGTGCCGC TGGCCTCAGT AATGTAG
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| Protein sequence | MPSVNFADIS AARLRISRYV RTSELMTSAL LNRWLGHEIL FKTECLQRTG AFKLRGALNT
LLHAKEKGVP IKRVVASSSG NHAQAVAYAA SLFDIPATIF SAQNISKIKA AATRAYGAEL
RLFPLRDEAD NAVAQAANEP GTLWIPPFNH PDVIAGQGTV TAEILEQTAD VNGIFMPCGG
GGLASGSMLA ARALSPQTKV IASEPLAGND AAQSLRLGSI QRLITPAKTL ADGAATPVVG
EHTYPLIQQL DGFYEVDETQ IAYWTQWLQH LLKLHVEPTS AMSMHGVVNY LAKQSAPQKV
VVILSGGNID AQKMQQIWQQ DHLINQPSLP SVPLASVM
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