| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3921 |
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| Symbol | |
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| ID | 4175701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4731949 |
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| End bp | 4732773 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638056949 |
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| Product | OmpA/MotB |
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| Protein accession | YP_663475 |
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| Protein GI | 109900220 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATA GCGCAATTGC ACTTACCCTC GCACTGCTCA TCAACCACGC TGTTGCCCCA
CTGACTTACG CGCAAACAAC GCCACATGCC CAAACCACGA AGGAGAAATC TGCCCAGTCA
AACACCCAGA ATGATCTCGT TGGCTTTGCC TCAGGCGCAT TATTAGGCAC TGCAGTCGGT
GGGCCAGTAG GCGGCGTGAT TGGCGGTATA ATGGGCCTGT TTATTTCAAA TGATATGAAC
AACGACAATG CATTAGCCCA AGCTCAGTCT GGACTGAGGC AAAAAGAGCA GCAATTGGTT
GCCTTACGCC TCGCTCAGCA GCGTATGTAT CAGCAAGAAA ATCCCGACAA TCACACCGCA
CTCACCGCGA GCTTAGAGAG CCATAACGTT ACAGCGCATC ACGGCACAGA GCAGCAAAGC
ACAGAACAAA CAACTGAGTC GCACTCTATA ACGCCAATTG AAACGAATAT TCAATTTCGC
ACCGGCTCTC ATGCTGTTGA ATCCCATTAT CACAGGCAGT TAGATTTAAT TGCTGCGCTT
GTGCGTCAGT CCCCTGATCT ACAAATAACC TTAGCGGGCT ACGCCGACGA GCGCGGCAGT
TCTCATTATA ACCAAGCGCT TTCTCAGCAA AGGGCTATCA GCGTTAAACG TTACTTAACA
AAGCAGCACG TGCCTGGCGC GCAATTGCAC ACTGAGTCTT TTGGCGAGTC CGCCGTGTCG
AGTGATAAAA GCGAGCCAGA GAGTTGGTTT TTCGCCCGTA AGGTCACGTT ATCTATCCAG
CCCGCGTCTC ATTCATCGCT TATGGCTGCT TCGCCACGTA AATAG
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| Protein sequence | MKYSAIALTL ALLINHAVAP LTYAQTTPHA QTTKEKSAQS NTQNDLVGFA SGALLGTAVG
GPVGGVIGGI MGLFISNDMN NDNALAQAQS GLRQKEQQLV ALRLAQQRMY QQENPDNHTA
LTASLESHNV TAHHGTEQQS TEQTTESHSI TPIETNIQFR TGSHAVESHY HRQLDLIAAL
VRQSPDLQIT LAGYADERGS SHYNQALSQQ RAISVKRYLT KQHVPGAQLH TESFGESAVS
SDKSEPESWF FARKVTLSIQ PASHSSLMAA SPRK
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