Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3920 |
Symbol | |
ID | 4175700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 4731004 |
End bp | 4731717 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638056948 |
Product | two component transcriptional regulator |
Protein accession | YP_663474 |
Protein GI | 109900219 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTGG TTATGTCTCA ACGTATTGCG CTAGTGGAAG ACGATCTCGC TATTCGAGAA AACTATGCCG CAGCCCTCAA AAAACAAGGA TACGAGGTTA TCTGTTATGC CAATCGCCGG CAGGCTGAGC AAGGTTTTGC TCAGCGCCTG CCTGACTTGG CGATCATTGA TATTGGATTA CAGGACGAGA TCGATGGCGG CTTTATGGTT TGCCAGCAAT TACGCAGTTT ATCCAAAACC TTGCCGATCA TTTTCTTCAC TGCCAGAGAT AACGACTACG ACACCATTTG CGGTTTACGC ATGGGGGCAG ACGACTACCT AACAAAAGAC ATTAGTTTGC CTCATTTGTT GGCGCGCATC GCTGCCTTGT TTCGCCGTGT GGCGCTGTTG AATCAACCCC AATTGTCAGA GGACGTAATA CAGACAGGTG AATTAAGTAT CGACAGCAAG CGCATGACCG TCAGTTGGCA AACACAAGGC ATTGAGCTAA CAGTGACTGA ATTTTGGATG CTACACGCCA TTGCCAAGTA TGCAGGGCAT GTTAAAAGCC GCCAACAGTT GATGGATGAG TCAAAAATGG TGGTAGATGA CAGTACTATT ACGTCGCACA TCAAACGTAT TCGCAAGAAA TTCCAGCAAG TCGACAGTCA GTTTGATCGT ATTGAAACGG TTTATGGCAT GGGTTATCGC TGGAAAAATG GCATGAGCCA TTAA
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Protein sequence | MSVVMSQRIA LVEDDLAIRE NYAAALKKQG YEVICYANRR QAEQGFAQRL PDLAIIDIGL QDEIDGGFMV CQQLRSLSKT LPIIFFTARD NDYDTICGLR MGADDYLTKD ISLPHLLARI AALFRRVALL NQPQLSEDVI QTGELSIDSK RMTVSWQTQG IELTVTEFWM LHAIAKYAGH VKSRQQLMDE SKMVVDDSTI TSHIKRIRKK FQQVDSQFDR IETVYGMGYR WKNGMSH
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