Gene Patl_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3910 
Symbol 
ID4175690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4715548 
End bp4716150 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content47% 
IMG OID638056938 
Producthypothetical protein 
Protein accessionYP_663464 
Protein GI109900209 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.714932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAT TAATCAAGTT TATCCCTACC TTTATCCTTG CGTTGCCGAT TTGCCTCAGT 
GCGTTCACTG TTAACGCAAG CACCGTTAAC GCTGAGGCAT CGGATCGAGA GAGTGAGGTA 
AAAGAAGCGC GTTTACTGAT TAAAGAATTC AGTGAAACGC TCAAAAGCAC GCTGTCTGCC 
GCCATTGAAC AGGGCGGATT AATTAATGCG CTGGATGCGT GTCATATTGA AGCCCCTGCT 
ATCTCATCTC GGCTTGCAGC GCAGTCAGGC TGGAAGGTTC AACGTACCTC GTTAAAACCC 
CGCAATGTAC TCAATAGTCC TGACAACTGG GAGTTAGCCA ATCTACAACG CTTTGAGCAA 
CGTAAAGAAG CTGGCGAGCC GGTAGCCAAT ATCGATACCT TTTCAACGAT ACAGGAAAAA 
GGGAAAACGG TTTTTCGCTA TATGAAAGCC ATTCCAACCA GTGGGCTGTG TTTAAATTGT 
CATGGCAACA GCGTAGCGCC CAGTGTGAAA GAGAAAATTG ATGCGTTGTA CCCTTATGAT 
GAAGCACTGG GTTTCACTGT GGGGGATATT CGTGGCGCAT TCACGTTGAA AAAGGTGGAG 
TGA
 
Protein sequence
MTTLIKFIPT FILALPICLS AFTVNASTVN AEASDRESEV KEARLLIKEF SETLKSTLSA 
AIEQGGLINA LDACHIEAPA ISSRLAAQSG WKVQRTSLKP RNVLNSPDNW ELANLQRFEQ 
RKEAGEPVAN IDTFSTIQEK GKTVFRYMKA IPTSGLCLNC HGNSVAPSVK EKIDALYPYD 
EALGFTVGDI RGAFTLKKVE