Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3907 |
Symbol | |
ID | 4175687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 4712685 |
End bp | 4714154 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638056935 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_663461 |
Protein GI | 109900206 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAATA TGCCCATATT TGAATCAATA TACGTTAATC CATCCCGTCG TGATTTGTTG AAAAAGCTAG TAGCGTTAGG CGTGACTTCC CTTGCCGTTT CGCCATTAGC ATATTCACGT AGCTTAGCTA ACTCTGAAAG TAGAATAATA TACCGTGACG ACCCAGATTA TGATGATTGG CGGCGCTCCA TGTTATGGAA GTCAAACGCT CCAGATCGAT ATCCTGACGT CATTATCCAA GCTAAATCCG AGCAGGAAAT TACTCAAGCA CTGAAGTTTG CTCAAAAGAA CGATTTACAA GTTGTATGCC GTACAAGTGG TCATAATGCT TCTTCCTCTG TATTACGTAA TGGGGGAATG TTATTAGACA TATCCGCTTT AAATGAACTA ACAGTAGATG CCCAACATAA ATTCGCTTAC GTACAGCCTA GCGTTAAAAT GATCCACTTA AATGAAGAAC TGAGAAAGCA TGGATTAGAC TTCCCCACTG CTAGCTGCCA AACAGTGTCA TTGGGGGGTT ACCTTCTTGG CGGAGGGATA GGTGCAAATA CCAGATACTG GGCTAAAGGC CCTGCATGCT ATTCCATAAT AAGTGCAGAT GTCATTTTAG CCGATGGTAA GAAGATCACC GCGAGTAAAG AGCAAAATGA GGATATTTAT TGGGCGATTA GAGGAATTGG TCCGGGTTTT TTTGGCATAG TCACGCGCTT TAAGCTTCAG GTATTTCCAA GCATTAAAGC CATACTTAAA AACACTTACT CATATCCGAT TGATCAATTA CCCAAAGTAA TTAAATCATT AGATAGATTC TCAAAACAGC ACACTCAAGA CGAGCGCGTC TCAGTGGGGA TATCTGTGCA CAATCACCCT AGTATTGCGG GAGAAATGAT AGTCAAATTA GGCGTAACAG CCTTCATTGA CAATGCACAA GATCCTACAG CAACCGCTAA GGCATTACTT GCCCCTTATG CTAAAAGTAC ATTTGCAGGG GATGCGTTTG ATAAATCTGA AAACGTACAT GTTCAGATTG AAAAGATGAA ATTTAGCACC AATCCCGCTG ACCGCTCAAA CCAAGACAAT TTCACGACCG ACAATGCCCA CGCATTCGTC GCTATTGCAA AACTGTTTAA AGATCGACCT ACCCCTGGTT TTTTGATTTT AGATTTGTCC TACAACAGTT TTAATCATGA GCGACTCAAA GATGCCAGCT ACTCAGCTTT AGGCAAACAC AAAATTTCGG CAATTATGCA TTGGAAAAAC GCAGCAGATG ATCCTGTAGC AACAAAATGG TTTGCTCGTT TCAATGCACT AATGCAGCCC TATGCTAATA GCCATTATAT AAATGAAGTT AATCATGAGT TCCCTGAACG AGTTAAAAAT AGTTTCACTT CAGAGAAGTG GGAGTACATA TCGATGTTAC GTAATAAGTA CGACCCTAAT AAACGCTTCC ATACGTACTT AGCATATTAA
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Protein sequence | MKNMPIFESI YVNPSRRDLL KKLVALGVTS LAVSPLAYSR SLANSESRII YRDDPDYDDW RRSMLWKSNA PDRYPDVIIQ AKSEQEITQA LKFAQKNDLQ VVCRTSGHNA SSSVLRNGGM LLDISALNEL TVDAQHKFAY VQPSVKMIHL NEELRKHGLD FPTASCQTVS LGGYLLGGGI GANTRYWAKG PACYSIISAD VILADGKKIT ASKEQNEDIY WAIRGIGPGF FGIVTRFKLQ VFPSIKAILK NTYSYPIDQL PKVIKSLDRF SKQHTQDERV SVGISVHNHP SIAGEMIVKL GVTAFIDNAQ DPTATAKALL APYAKSTFAG DAFDKSENVH VQIEKMKFST NPADRSNQDN FTTDNAHAFV AIAKLFKDRP TPGFLILDLS YNSFNHERLK DASYSALGKH KISAIMHWKN AADDPVATKW FARFNALMQP YANSHYINEV NHEFPERVKN SFTSEKWEYI SMLRNKYDPN KRFHTYLAY
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