| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3906 |
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| Symbol | |
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| ID | 4175686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4710919 |
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| End bp | 4711848 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056934 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_663460 |
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| Protein GI | 109900205 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAGCCGTGAC CATTTCATTC TTATTGTTGG GTTTATTAGG TTCACAACAA
ATTGTCGCAG CAACATTAGA AAAATCAGAT ATAACTAAAG TTGTTATGTT AGGTACTGGG
ACGCCACACC CATCCCCTCA ACGCTCAGGG CCTAGCGTAG CAATTGTGGT CAATGATACG
CCTTACCTCG TGGATTTTGG CCCAGGGGTT GTTCGTCGGG CCGCATCTAT GTCGCCAGTA
TATGGTGGAC CTATAGACGG GCTAAAGATA ACTAAACTGA ATCGTGCATT TTTAACCCAC
ATGCACTCAG ATCACACCGC TGGGCTTGCA GATTTGGTAT TGACCCCTTG GGCTATGGGA
AGAAAGTCTC CCTTAGAGAT CTATGGTCCT GAGGGAGTTG TAGACATGTC TAAAAACCTT
TTGAAAGCCT ATGACCAGGA TATCAAATAT CGCCTTTATG GTTTGCAGCC TGCAAATAAT
CAAGGATGGC GAGTCAATGC GCACGCAGTT AAAGAGGGTG TCGTGTATAA AGACGAAAAC
GTCACCGTTG AAGCCTTTCC AGTCAAACAT GGCTCGTGGC CCGATGCCTT TGGGTATAGG
TTTACAACAC CCGACAGGGT CATTGTTGTT TCAGGTGATA AAGCTCCGGA TGGTAACAGC
ATAAAATACA GTAAAAATGC AGATATTTTA ATCCATGAAG TTTACTCAGA TGAGGGAAAG
AAGAGCTTAT CCAAATTTTG GCAAAATTAT CATAGCAACA ACCATACTTC AGGTATTGAA
CTTGGCAAAA TAGCTCAAGA ATCCAACGTC AAAAAGTTAG TTCTTTATCA TATATTATTC
ATGGGAGATG ATGCCGAGAA CATCGCAAAT GAGGTGCGCT CATCTTTTAC TGGCGAAGTC
ATCATCGCAA ACGATAGAGA TATCTATTAG
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| Protein sequence | MKKIAVTISF LLLGLLGSQQ IVAATLEKSD ITKVVMLGTG TPHPSPQRSG PSVAIVVNDT
PYLVDFGPGV VRRAASMSPV YGGPIDGLKI TKLNRAFLTH MHSDHTAGLA DLVLTPWAMG
RKSPLEIYGP EGVVDMSKNL LKAYDQDIKY RLYGLQPANN QGWRVNAHAV KEGVVYKDEN
VTVEAFPVKH GSWPDAFGYR FTTPDRVIVV SGDKAPDGNS IKYSKNADIL IHEVYSDEGK
KSLSKFWQNY HSNNHTSGIE LGKIAQESNV KKLVLYHILF MGDDAENIAN EVRSSFTGEV
IIANDRDIY
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