| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3884 |
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| Symbol | |
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| ID | 4175664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4681539 |
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| End bp | 4682477 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056912 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_663438 |
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| Protein GI | 109900183 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA TAATTGTAGG CCCTGGCGCT TTTGGAATTA AACACTTAGA TGGCATTAAG
AATATTAACG ATGTTGAAGT GGTCGCCTTA GTCGGACGTT CCGCTGAAAA AACACAAAAA
GTGGCGGATG AATATGGCAT CCCACACATT TTCACAGATT TAGCCGAAGC CCTGAAAATC
GATGCTGACG CCGTTATTTT ATGTACACCG ACTCAGCAAC ATGCTGAGCA ATCAATTCAA
TGTATGCAAG CTGGCAAACA TGTGCAGGTT GAAATCCCTT TAGCGGACTC GTGGGCGGAT
TCTCAAGCGG TAGTTAAAGT ACAGGAAGAG ACAGGCAAGG TCTGTATGGT CGGTCATACG
CGACGCTTTA ACCCCTCTCA CCAATGGGTT AATCAGCGCA TCACGGCTGG CGAACTGAAT
ATTCAACAGA TGGACGTGCA AACTTATTTC TTCCGTCGTA AAAATATTAA TGCGAAGGGG
GAAGCTCGTT CATGGACTGA CCATTTATTG TGGCACCATG CTGCCCACAC AGTTGATTTA
TTCGCCTATC AAGCGGGCAG TAAAATAGTT AAAGCCAACG CAGTGCAGGG GCCGATTCAC
CCTGAACTGG GGATTGCATT GGATATGTCA ATTCAGTTAC AAGCGGAAAA CGGCGCTATT
TGCACCTTGT CATTGTCATT TAATAACGAT GGTCCTCTTG GTACTTTCTT CCGCTACATC
TGTGACAATG GCACTTATAT CGCACGTTAT GATGACTTAT TTGACGGCAA AGAGAACAAA
ATAGATGTGT CGAATGTCGC TGTGTCAATG AATGGTATAG AGCTACAGGA CAGGGAATTC
TTTACTGCTA TTAAAGAAAA TCGAGAACCC AACTCGAGCA TTGGTCAAGT ATTGGCTTGT
TATAAAGTTC TGCACGACCT TGAACAGCAA CTTGTATAA
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| Protein sequence | MKVIIVGPGA FGIKHLDGIK NINDVEVVAL VGRSAEKTQK VADEYGIPHI FTDLAEALKI
DADAVILCTP TQQHAEQSIQ CMQAGKHVQV EIPLADSWAD SQAVVKVQEE TGKVCMVGHT
RRFNPSHQWV NQRITAGELN IQQMDVQTYF FRRKNINAKG EARSWTDHLL WHHAAHTVDL
FAYQAGSKIV KANAVQGPIH PELGIALDMS IQLQAENGAI CTLSLSFNND GPLGTFFRYI
CDNGTYIARY DDLFDGKENK IDVSNVAVSM NGIELQDREF FTAIKENREP NSSIGQVLAC
YKVLHDLEQQ LV
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