Gene Patl_3867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3867 
Symbol 
ID4175647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp4661821 
End bp4662153 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID638056895 
ProductSecC motif-containing protein 
Protein accessionYP_663421 
Protein GI109900166 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAGT TTTTCTTCAA AGGCCGAATA GATCCCCGGG AAAAATACCA GAGATTTGGC 
TACAACACTC AGCGAAAAAC CAAGGTGGGC AGTGAAAATG CACCGCTACA CATCTCGGTG
CAGAACCACG AAAGGGAAGT CGAGCTAAAA TCTGTTCTAG CTGAACATAA TCTGCATGCT
GAAATCACCG TAGATGCTGA TAAGCCTGAA AATACGATTC AACTCGATAC CTTACTCAAA
GTGCCAGGTA CACAGACGTT CGTTAAAACC CCAAATCGAA ACGACCCCTG CACCTGCGGA
AGCGGTAAAA AATATAAAAA ATGTTGTGGC TAA
 
Protein sequence
MSKFFFKGRI DPREKYQRFG YNTQRKTKVG SENAPLHISV QNHEREVELK SVLAEHNLHA 
EITVDADKPE NTIQLDTLLK VPGTQTFVKT PNRNDPCTCG SGKKYKKCCG