| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3836 |
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| Symbol | |
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| ID | 4175616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4631159 |
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| End bp | 4632175 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056864 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_663390 |
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| Protein GI | 109900135 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation
[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATGT CAGTCCTTAT TTGTGATGAC TCCGGTTTTG CTCGCCGTCA AATGGCTCGT
GCGATACCAG ATGGTTGGGA TGTGGACATT TACTTTGCCG AAAATGGTAA AGAAGCGCTC
AGTGCCATCA AGCAAGGACA AGCTGACGTC ATGTTTCTCG ATTTGAACAT GCCGGTAATG
GATGGTTATC AGACTATGCA GGTCGTAAAA GAGCAGGATC TGCCTACTCT GGTGATCGTA
GTCTCGGGAG ATGTTCAACC TGAAGCCCAT AAAAAAATGC TGGGCCTTGG TGCTATAGCT
TTTATTCCCA AGCCTATCGA TAATCAAAAG TTGGGCGAAA TACTACGCCA GTACGGTGTG
TATTCAGGTG ACATGACCTG TAAGGGGCGT TCTGAAAAAG TTGCTATTGT TGAGCCTCAT
AGCCAGGGCG CAGAGCTTGA CGCTTACCGT GAAATGGCAA ACGTAGCTAT GGGAAGAGCC
GGCGAGAACG TTGCTAAGCT GCTTGGGGAG TTTATTCAAC TGCCTATCCC TAATGTAAAT
CTAATTACTA ACAACGAATT ACACATGGCG ATGTCTGACG TGAAAACTAG CGACAGTATA
TCTGCTGTTT CCCATGGCTT TATCGGCGCT GGAATTAACG GTGAAGCATT GGTGATTTTC
AATGATGCCA ACATCGCAAA TATGGGCAAG TTGTTGAACT ACAAACATAA TAGCACTGAA
GAAGAATCCG AATTAGAAGT GCTGATGGAT ATTTCCAATA TTATTGTGGG CGCCTGCATC
AATGCATTGT CAGAACAACT ACATGTCACC TTTAGTCACA ATCATCCGAT AATTTTAGGG
CGCCATTGTG ACATTGACCA AGTGCTTGAG AGCAATCATC AGCGCTGGGA TAAAATTCTC
GCAATTGAAA TAGCCTATGC GATTAAATCC CACGATATTC AGTTTGATTT GTTGTTGCTG
TTTCCTGGCA ATGCAATGGA ATTGGTTTAC GCAAAACTTG TTACGGTTAC CCAATAG
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| Protein sequence | MTMSVLICDD SGFARRQMAR AIPDGWDVDI YFAENGKEAL SAIKQGQADV MFLDLNMPVM
DGYQTMQVVK EQDLPTLVIV VSGDVQPEAH KKMLGLGAIA FIPKPIDNQK LGEILRQYGV
YSGDMTCKGR SEKVAIVEPH SQGAELDAYR EMANVAMGRA GENVAKLLGE FIQLPIPNVN
LITNNELHMA MSDVKTSDSI SAVSHGFIGA GINGEALVIF NDANIANMGK LLNYKHNSTE
EESELEVLMD ISNIIVGACI NALSEQLHVT FSHNHPIILG RHCDIDQVLE SNHQRWDKIL
AIEIAYAIKS HDIQFDLLLL FPGNAMELVY AKLVTVTQ
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