| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3835 |
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| Symbol | |
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| ID | 4175615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4630197 |
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| End bp | 4631147 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056863 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_663389 |
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| Protein GI | 109900134 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGATA TGAAAGAGTT AGCTGAAATG CATTGGAAGC ACGATTTACT TGGCTCCATT
GAAGTAGGCA TAGTGGTGGT TGACAGGGAA TATCTGGTAA TGGTGTGGAA CTTGTTTATG
GAGAACCACA GCAATATCGC GCCGAGTACG ATCCGAGGTA CATCTCTATT TACGCATTTT
CCTGAAATCG ACGAAACTTG GCTAAGGGCC AAGGTCGAAC CTGTTTTTTC CATGAAAAGC
CCGGTTTTTG TTATCTGGGA ACAGCGGCCT TTTCTTTTTC GGTTTGGGGC TAATCGACCT
ATTACTTCAC CCTCTAAGTT TATGTACCAA AACATCACCA TATTTCCATT GGCCTCTTTA
TCGGGGCAAG TAGAACAAGT GTGTATCGTG GTGTATGACG TAACCGATCA GGCTGTAAGT
AAGCAGGCAG TTGATGAACT CAACAGTGAG TTGCAGCGAT TAAGCCGAAT AGATGGTCTA
ACAGGCATTT TTAACCGCCG CTATTGGGAA GAGCAATTTA GTCGCGAATT TAAACGAAAT
TTGCGTAAGC CGAGTCAGTC GTCAGTCATC ATGTTAGACA TCGATAATTT TAAAAAAATC
AATGATAACT ACGGTCACCC TGCGGGCGAT GAAGTGATAC GCCAGCTCGC CAAGCTGATC
GAGGATGTTA CAAGAGAAAC AGACATCTGT GGCCGTTATG GCGGTGAAGA ATTTACAATT
TTATTACCCG ATACTGCCTC ACAAAATGTC ATGGTTCTTG CTCAACGTAT CAGAGAGACT
GTGGAAAATC TCAAAATTGA GTATGAACAG CAGACTATTT CCTTTACAGT CAGCTTAGGA
ATAGCGCAAT TTTCCCCTGT ATTTGAACAA CATATACAAT GGTTAGAAAG TGCTGATAAA
GCCCTATATC AAGCGAAAAT TAGCGGCCGT AATCGGGTGG TTATTGCTTA A
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| Protein sequence | MQDMKELAEM HWKHDLLGSI EVGIVVVDRE YLVMVWNLFM ENHSNIAPST IRGTSLFTHF
PEIDETWLRA KVEPVFSMKS PVFVIWEQRP FLFRFGANRP ITSPSKFMYQ NITIFPLASL
SGQVEQVCIV VYDVTDQAVS KQAVDELNSE LQRLSRIDGL TGIFNRRYWE EQFSREFKRN
LRKPSQSSVI MLDIDNFKKI NDNYGHPAGD EVIRQLAKLI EDVTRETDIC GRYGGEEFTI
LLPDTASQNV MVLAQRIRET VENLKIEYEQ QTISFTVSLG IAQFSPVFEQ HIQWLESADK
ALYQAKISGR NRVVIA
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