| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3817 |
|---|
| Symbol | |
|---|
| ID | 4175597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 4605949 |
|---|
| End bp | 4607442 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056845 |
|---|
| Product | tryptophan halogenase |
|---|
| Protein accession | YP_663371 |
|---|
| Protein GI | 109900116 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.270075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGC CAATACGCAA AGTAGTCATA GCAGGTGGTG GTACGGCAGG TTGGATGACC
GCTGCCATGC TCAGTAAGGT TTTAAAAGAG CAGGTCGAGG TTGTATTAGT TGAATCCGAA
GAGATTGGCA TCATAGGGGT TGGCGAAGCG ACAATTCCTC CCATACACAC ATTTAACACT
TATCTAGGTT TAGACGAAAA AGAGTTTTTA CGAGAAACGA AAGCGACAAT CAAGCTGGCG
ATAAAATTCG AAAACTGGCG GGTCAAAGAT GAGAGCTATT ACCATACGTT TGGTGCGCCA
GGTACGAACA TGGGGTTTTG CAGTTTTCAA CATTATTGGC TGCGCGCCAA GCAAGCAGGC
ATGACAACAC CTCTGTGGGA TTTCGATTTA AATTATCTGT GCTGTGAACA GCAAAAATTC
AATAAAATCA ATACCCAAAA CCCAGTATAC GAAATGCAAT ATGCCTATCA TTTTGACTCT
GGTTTGTATG GTCAGTACTT GCGCAAACTA TCCGAAAAGG CGGGGATAAC CCGAATAGAA
GGGAAAATAG AGCATGTGCA GCGTGACGAG CCGTCGGGTT TCATTACCGG CTTGCAGTTA
CATAGCGGCC AACAAATAGA GGGCGATTTA TTCATTGATT GCACCGGCCA AAGAGGCTTG
CTAATCAAAG GAGCGATGGG GGTCGAATTT GAAAGCTGGA AAGACTATTT ACCAGCGGAT
ACGGCATTAG CTGTACCCAG CGAACGCTTT GAGCGCACCT TACCTTACAC CCGCAGTATT
GCCCATGCGT CAGGTTGGCA GTGGCGTATT CCGCTAACGC ACAGAAACGG CAACGGCATT
GTATACAGTT CGTCGTATTT ATCCGATGAA GATGCCCATC AAACCTTGAT GAGTAATTTA
GACAGCAAAC CCTTGGATGA AGCACGCAAA ATACAGTTTC AAACCGGAAG AACAACTCAG
CAATGGCACA AAAATGTTGT CTCAGTTGGT CTCTCAAGTG GCTTTTTAGA GCCATTAGAA
TCTACCAGTA TTCACCTTAT TCAATCTGCT ATTGTGCGAT TATTAAAAAT GTTTCCGAAC
GAGACGATCG AGCAAAGTGT GATCGATGCC TACAATGAAG AGTCCAAGGC CGAATTTGCC
ACTATCGCTG ACTTTATTAT TTTGCATTAT CATGTAAATG AACGAAATGA TTCAGATTTT
TGGAAAGACA GGCGGGAAAT GCCCATACCA GAGCGGTTAA AACAAAAAAT CGCTCTATTC
AAAAGTTCAG GGGCTATCTT TAACGAGCCT CTCGATATAT TTAGAGATGC TTCTTGGTTA
CAAGTCATGC TAGGTCAAGG CATTGAGCCT CAGGGGTATC ACCCCGCGGC TAACGTACCT
AGCAAAAAAG AATTACTCGC AGTCATGCAG AAAATACAAA CAGCCAAACA ACAGCCCTTA
GGACAAATGT TATCTCATGA TGAATTTTTA GCGCGTTATA CCAAACAGGG TTAA
|
|---|
| Protein sequence | MAAPIRKVVI AGGGTAGWMT AAMLSKVLKE QVEVVLVESE EIGIIGVGEA TIPPIHTFNT
YLGLDEKEFL RETKATIKLA IKFENWRVKD ESYYHTFGAP GTNMGFCSFQ HYWLRAKQAG
MTTPLWDFDL NYLCCEQQKF NKINTQNPVY EMQYAYHFDS GLYGQYLRKL SEKAGITRIE
GKIEHVQRDE PSGFITGLQL HSGQQIEGDL FIDCTGQRGL LIKGAMGVEF ESWKDYLPAD
TALAVPSERF ERTLPYTRSI AHASGWQWRI PLTHRNGNGI VYSSSYLSDE DAHQTLMSNL
DSKPLDEARK IQFQTGRTTQ QWHKNVVSVG LSSGFLEPLE STSIHLIQSA IVRLLKMFPN
ETIEQSVIDA YNEESKAEFA TIADFIILHY HVNERNDSDF WKDRREMPIP ERLKQKIALF
KSSGAIFNEP LDIFRDASWL QVMLGQGIEP QGYHPAANVP SKKELLAVMQ KIQTAKQQPL
GQMLSHDEFL ARYTKQG
|
|---|
| |