| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3810 |
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| Symbol | |
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| ID | 4175590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4595584 |
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| End bp | 4596564 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638056838 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_663364 |
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| Protein GI | 109900109 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAT TTAGCGTTAC TGGTAGTGAT GGTCTGCCAC TGAGTTGTTA TCAGTGGCTG
CCCACTGGCG TTTCGGCTGC CAGTGCTGAG CCTGCAGGAA ACGAGCCTGC AGACAGTGAG
CCTGTCAGTA ACGTGCGTGC AGTGATACAC ATTGCTCACG GTATGAGTGA ACATGCCCTG
CGATACGAGC GGTTTGCGTT GGCGCTGAAT GAAGCAGGTT TCGCTGTGAT AGCGAACGAT
CACCGAGGGC ATGGCCGCTC AGTTTTAAAG GATCGCGAAC TGGGGCATAT GGCGGATGAA
GACGGTTGGC ATAAAGCGGT GAATGATTTA GCCGTGGTTA ATCAACACAT TCAACGGCGC
CTACCTAATA CTCCGATTAT CTTACTCGGT CATTCCATGG GCTCATTTAT GACCCAAGAT
TATATGGCGC GTTATGGTGA TACGATTTCT GCCGCGGCCC TATCGGCAAC CAATGGGCCG
GTGGGCGCAT TGCTTAAGGT GGGCCAGATG TTAGCGCGAT TTGAGCGGCG CAGGTTAGGG
GCTACTGGGC ATAGCCCCGT CATTTTGAGC ATGGTATTTG GTGCATACAA TAGAGCGTTC
AAACCCAATC GGACTGAATT TGACTGGCTC TCTAGAGATG AGGCTGAAGT CGATAAATAT
ATCGCTGACC CTCTGTGTGG TTTTGAATGT TCTACCCAAA CTTGGAACGA CATGTTTACC
GCATTAGGCA CGATAGCGTC TGAGCACGCC CTCAAAAAAA TAGATAAGAC CCTGCCGATT
TATGTGTTTT CAGGCACTGA TGATCCCGTC GGTGAAAAGG GCAAAGGCGT TCAGCGATTG
CTAAACGCCT ATCAAAAACA GGGGTTAACC CAGGTCACAC ATCAATTCTA CCAAGACGGA
CGTCACGAAT TGTTAAGCGA AATCAATCGC GAGCAAGTCA CCGCCGACTT TATTCAATGG
GCAAAAAGCG TCTTAAACTA A
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| Protein sequence | MQTFSVTGSD GLPLSCYQWL PTGVSAASAE PAGNEPADSE PVSNVRAVIH IAHGMSEHAL
RYERFALALN EAGFAVIAND HRGHGRSVLK DRELGHMADE DGWHKAVNDL AVVNQHIQRR
LPNTPIILLG HSMGSFMTQD YMARYGDTIS AAALSATNGP VGALLKVGQM LARFERRRLG
ATGHSPVILS MVFGAYNRAF KPNRTEFDWL SRDEAEVDKY IADPLCGFEC STQTWNDMFT
ALGTIASEHA LKKIDKTLPI YVFSGTDDPV GEKGKGVQRL LNAYQKQGLT QVTHQFYQDG
RHELLSEINR EQVTADFIQW AKSVLN
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