| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3804 |
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| Symbol | |
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| ID | 4175584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4588568 |
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| End bp | 4589194 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056832 |
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| Product | hypothetical protein |
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| Protein accession | YP_663358 |
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| Protein GI | 109900103 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2020] Putative protein-S-isoprenylcysteine methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATAT CTGGACAGGC GTTGATACTA ATTGAGTTTA CGCGAGGTTA TCTTGCCGTT
TTCTTTACCT TTGTCGCCCT TTTTTATGCC GTAAAGATCA CCATAGCAAA GTACAAAAGC
GGTAACGAGC AAGTGTTTGC GGGAGAGCGG TTTTGCACTT CTTGGTGGAA TCACACACTT
TTTCGTTTAT TTCGAGTCAT TATTTGGATG GTTTGCTTAT TCAGGTGGGG TTTTCCCGCA
CTTGATTACT ACTTAGGCAT ATTCTCATTT TTGCTTGTCC CTTGCGTGTT ACTGACAGGC
AATATTTTAC TGACCCTTGG ATTTACTGTA ACCATTATAG TGCATTTGAG CATGGGCGAA
TATTGGCGCT CAGGTGTTGA CCCAACAGGA CCTAGAACAC TCCTTACACG GGGGTTCTTC
CGCTTTTCGC GCAATCCTAT GTTTACTGCT ATTGCGGTGG CTCAATTAGG CTTTTTTCTG
GCTCTGCCCA GTGTTTTTTC GCTAATTTGC CTGCTCGTTG GTGTACTTTC ATTGGTCCGC
CAAATCCGAG TTGAAGAAGC GCATTTGTCT CAAGCCTATC CTGTGGCATA CACCGACTAT
TTACTCAACG TTAGGCGTTG GCTTTAG
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| Protein sequence | MEISGQALIL IEFTRGYLAV FFTFVALFYA VKITIAKYKS GNEQVFAGER FCTSWWNHTL
FRLFRVIIWM VCLFRWGFPA LDYYLGIFSF LLVPCVLLTG NILLTLGFTV TIIVHLSMGE
YWRSGVDPTG PRTLLTRGFF RFSRNPMFTA IAVAQLGFFL ALPSVFSLIC LLVGVLSLVR
QIRVEEAHLS QAYPVAYTDY LLNVRRWL
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