Gene Patl_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3781 
Symbol 
ID4175561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp4555764 
End bp4556369 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content43% 
IMG OID638056809 
Producthypothetical protein 
Protein accessionYP_663335 
Protein GI109900080 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTT TGCTTTTCGA AAAAAAATTA TCTCAACATC CCCAAAAACG CAGATCCATT 
CTGATAAAAA TGAGTAGATT ATCATTCAAA GGAAACGTAA ACATGATGCT ATGCCCTCGA 
ACTAAATCAC CGTTAAAGAA GGGGAATGTT GGAAAAGTGC CGGTCTTTAT CAGCGAAGCT 
TGTGGTGGGG TTTTCTTTGA TAACTCAACC ATCCAGCAAT TCGAAAAGCC CACTGGAAAG 
CGCGGCGCTG CCTTGGCTTC ACACCTTGAT AAATTTCATT GCGCGCTTTT AGATTTGAAT 
GAGCGAATTA ACTGTCCTAC CTGCACAGAT ACTGTCATGC TTCGTCGTTT TTATAGTCTC 
ACCCATGCTG TTGAGATAGA TGAATGCCCC GGCTGCGGTG GGATTTGGTT AGATACCGGC 
GAACTAGCAA AACTGCAGTC ACTATTGCTG AACGAAAAAG AGCGCGCGAT ACTTGTTGCT 
CAACTAATCG AATCACATAA ACCAGTGGAG ATAACAGGGC TCCCCCACAT TCACGACAAC 
TGGCTTCACC GAAACAATAA AATCAGCAAC TTGGTCGACC TAACTTTCTA TATAATCGGC 
GATTAA
 
Protein sequence
MRRLLFEKKL SQHPQKRRSI LIKMSRLSFK GNVNMMLCPR TKSPLKKGNV GKVPVFISEA 
CGGVFFDNST IQQFEKPTGK RGAALASHLD KFHCALLDLN ERINCPTCTD TVMLRRFYSL 
THAVEIDECP GCGGIWLDTG ELAKLQSLLL NEKERAILVA QLIESHKPVE ITGLPHIHDN 
WLHRNNKISN LVDLTFYIIG D