| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3710 |
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| Symbol | |
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| ID | 4175490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4472045 |
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| End bp | 4472767 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056740 |
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| Product | DNA repair protein RecO |
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| Protein accession | YP_663266 |
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| Protein GI | 109900011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAGCTG AACAACTCAA TGGCTATGTA TTGCATCGAC GTGCATATCG CGAAACAAGC
TTTCTGGTTA ACATTTTCAC CTTAGAAAAC GGTAAAGTGT CTGCTGTTGT GAAAGGTGTT
CGCGGTAGCA AAAGCGACAA AAAGAGCCTT CTTCAACCAT TTCAGCCGCT GTTGATTGGG
GTGTCAGGGC GCTCCGAATT AAAAAACTTA CAACAGGTAG AGTCCACCGG CGCAATGATA
CGCTTGGCCG GGCAAGCTTT GTATTGCGCC CTTTATTTGA ACGAAGTTTT GAATCGTGTA
CTGGCGGATG AGATCCCCCA TCCCGAGATT TTCGTACTGT ATCAACAAAG TATGCATGCC
TTAGTAGCCC AAACAAACTT TGAACCCGTT TTGCGTAGCT TTGAGCTAGG CCTGCTCGAT
GCATTAGGCT ACGGAATTGA TCTTACTCAT GATGCTGATA CAGGCCAGCC TGTTGCTGAT
AATGGATATT ACCGGATAGT GCCTGAGCTC GGCTGCGTAT ATCAAGGTGA CATACGTTTG
TCTGGCTGTT ATTCAGGCCA AAGTTTATTG AATGTGGCCA GCGAAAACTG GGACAAAGAC
AGTTTATTAG CCGCTAAGCA CATCACTCGA ACTACGCTCG GGGAGTTGTT AGGCAGTAAA
CCGCTAATGA GCAGAGAGTT ATTTAAACAA ACCCATTTTA AATCGAGAGG GAGAGAGCTT
TGA
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| Protein sequence | MAAEQLNGYV LHRRAYRETS FLVNIFTLEN GKVSAVVKGV RGSKSDKKSL LQPFQPLLIG
VSGRSELKNL QQVESTGAMI RLAGQALYCA LYLNEVLNRV LADEIPHPEI FVLYQQSMHA
LVAQTNFEPV LRSFELGLLD ALGYGIDLTH DADTGQPVAD NGYYRIVPEL GCVYQGDIRL
SGCYSGQSLL NVASENWDKD SLLAAKHITR TTLGELLGSK PLMSRELFKQ THFKSRGREL
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