| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3676 |
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| Symbol | |
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| ID | 4175456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4433475 |
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| End bp | 4434191 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056706 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_663232 |
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| Protein GI | 109899977 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGT CTGTTGTTAT TCCTGCAAAA AATGAGGCGC AAAATGTTGC GCCACTTATC
CATGAAATTA TCGATGTACT TGGCGGTGTG GCTGAATTCG AAATTGTCTA TGTAGATGAT
GGAAGTGATG ATCGCACGAT AAATGAATTG TATAGAATCA TTGATGCGGG TTTTGACTGC
ATTCAACCGG TAAGACACAA AGTTAGTGTG GGACAAAGTA CAGCCATTAT GAGTGGGGTG
AAAGCCGCCT GTGGTGAACT TATCGTGACC ATGGATGCAG ATGGCCAGAA TGATCCAGCG
GATATTCCAA CGTTATTAAG CGCTGCACGA AGTGTTGTTC AAGGCTCCGA TTATTGTGTC
GCGGGGTATC GCCGCAAACG CAAAGACACC CCATGGAAAC GTTTCCAATC TAAAGTGGCC
AATGGTGTGC GTGCTCGCCT ATTAGGGGAT GGCACGCCTG ATACCGGCTG CGGTTTGAAA
ATCATACCCA AATATACCTT CATGAAACTA CCGTACTTTG ATCATATGCA CCGCTATATT
CCGGCCTTGG TGAAAAGAAT ACATGGCCAA GTGATTGTGA TTGAAGTAAA TCATCGAGAC
CGTCAAGCCG GAGAATCGAA GTACAATATG CTGGGACGTC TTCAAGTGGG GATCGTCGAT
ATCTTTGGAG TACTATGGCT ACAACGTAGG GTCAAAGTAC CAGAATATTT GGATTAG
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| Protein sequence | MELSVVIPAK NEAQNVAPLI HEIIDVLGGV AEFEIVYVDD GSDDRTINEL YRIIDAGFDC
IQPVRHKVSV GQSTAIMSGV KAACGELIVT MDADGQNDPA DIPTLLSAAR SVVQGSDYCV
AGYRRKRKDT PWKRFQSKVA NGVRARLLGD GTPDTGCGLK IIPKYTFMKL PYFDHMHRYI
PALVKRIHGQ VIVIEVNHRD RQAGESKYNM LGRLQVGIVD IFGVLWLQRR VKVPEYLD
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