| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3659 |
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| Symbol | |
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| ID | 4175439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4412160 |
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| End bp | 4414424 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056689 |
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| Product | Poly(beta-D-mannuronate) lyase |
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| Protein accession | YP_663215 |
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| Protein GI | 109899960 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCGA ATTTTCACTT TATTTCTTTG GCTCGTCCAG CTCTGCTGTC GATGATATTT
ATCGTGTGTC AAAACGCCTT GGCGGCAGAT ACTTTAGTCA AAACGCCTGA AGCCTATGAA
GACGCGCTAA AAAGCGTTCA ACCTGGTGAC GCCATCATTT TGGCTAACGG TACATGGCAA
AACTTTGAAA TTTTGCTCGA TGCCAAAGGC ACCAAAGAGC ATCCCATAAC CCTACGTGGC
GAAACACCCG GTAAAGTATT TCTTACTGGG CAGTCAAACT TGCGTTTAGC CGGTGAGTAT
CTTGTGGTCA GTGGACTAGT GTTTAAAGAT GGTTATACAC CCACTGGTGA AGTTATCGCG
TTTCGCCGTA ATAAAGACAA GCTCGCTAAC CACAGTCGCG TAACCCAAGT TGTCATTGAT
AATTACAGTA ATCCTGAGAA GTTCGAACAA GACAGCTGGG TGATGGTATA TGGCCGACAT
AATCGGTTTG ACCATAATCA CTTAGTAGGT AAGCGCAATA AAGGTGTGAC GATGGCAGTG
CGTTTGACTA GCGAGTCTAG CCAGCAAAAT TATCATCGCA TTGACCATAA TTACTTCGGA
CCGCGCCCTA TTCTAGGCTC TAATGGTGGC GAAACGTTGC GTATTGGTAC CAGTCATCAT
TCGTTAACGA ATTCTTTTAC CACCATCGAA AATAACTTTT TTGACCGCTG TAACGGCGAA
GTGGAAATCA TCTCTAATAA GTCGGGCAAA AACAGTATCC GTAACAACGT ATTTTTCGAA
TCTCGAGGCA CGTTAACCTT ACGCCACGGT AACGGTAATA TTGTTGAAAA TAACGTGTTC
TTCGGTAATG GCGTTGACCA CACGGGGGGC ATACGAGTTA TCAATCGTGA TCAAATTATT
CGAAATAACT ACCTTGAAGG TCTAACTGGC TACCGCTTCG GCAGTGGCTT AACAGTGATG
AACGGCGTAC CGAATTCAAA AATTAATCGC TACCATCAAG TCGACAATGC CCTGATCGAA
AACAACACTC TGGTTGATGT AAAGCATATT CAATTTGCCG CAGGCAGTGA CAAAGAGCGT
TCGGCAACGC CAGTCAACTC ATTAGTGAGA AACAACTTGA TCCTGAGTGA GCAGGGCACT
GACGGAATAA CGGTGTTTGA TGATATCAGT GGCATTACGT TTGAAGACAA TTTGCTTAAT
CAAGATACCA AAGCGACCCT TGAGGAAGGA TTCAAGCAGG CCGAGATTAC CATGAAGCGG
GCGGATAATG GCTTATTGTA TCCAGCGGAT GAAGCACAGC GTAAGTTTGG TGTGAGCTCT
GATATAAAAC CGATTGCTAA AAATGACGTC GGAGTGAGTT GGTATCCAAA AGTGGAGCCA
GACGTCGCCT TCGGTTCAGG GACAACGATC CCTGTGGCGC CAGGAGATAA TACCTTGTTC
GATGCGATCG CTTCCGCGAA GTCAGGTGAC GTTTTAATTC TACAAGGTGG AGAGTATAGG
GTTTCAAAAA TTCTAAAGTT GGACAAAACT CTTACTATCC GTGCACAAGA TAATGCTGCT
GCGGTGATTT ATCCTCAACG CTCGACGCTC ATTGAAATCA ATAATATGGG CAACTTAACA
TTGGACGGTG TGCGGGTTGA TGCTAAAAAT GCCCCGGATG CGGCAGGGAA CACGCTTATT
CGCACCACCC GTTTACCTAT GCAACGTAAT TACCGGGTGG CGATAAAAAA TAGCACTTTC
GAAAACCTCA ATATTAACCA CTCCTATCAC TTTTTTGATG TAGGCAATCG CAGTTTTGCA
GACTACATTC AAGTGACTAA TAGCCATTTC TCTCATATTA CCGGTGACTT ATTCCGCCTA
GACAAGGAGA CGGATGATCT GGGTATTTAC AATGTTGAAT ATCTCACCAT TGAGGATTCC
ACGGTAACGG ATCTTGATGG AGCGATAGCA AAGGTTTATC GCGGTGGAAC AGATGAAAGC
ACCTTTGGCC CTCATGTTGT GCTAAACAAC AACACATTTA GTGAAATTGG CAAAGGTAAG
CGGAATAAAA GTAAAGCGAG TTTGGTATTG CACGGTACTC AGGTGAATAA GGTAACGGCG
AATAAGTTTA TTAATACAGC TCCTGTAATC TTTGAACTTA CCGTTGGTGA GCCGAAAACT
TGGATAACCG ATAACGTATT TGAAGGGACA TCAGAACCCA TCATCAAAGA CCTATTTCCA
CTTAGCGGTG TAACAACAAT TATCAGCGGA AACAAAACGC TATAG
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| Protein sequence | MRANFHFISL ARPALLSMIF IVCQNALAAD TLVKTPEAYE DALKSVQPGD AIILANGTWQ
NFEILLDAKG TKEHPITLRG ETPGKVFLTG QSNLRLAGEY LVVSGLVFKD GYTPTGEVIA
FRRNKDKLAN HSRVTQVVID NYSNPEKFEQ DSWVMVYGRH NRFDHNHLVG KRNKGVTMAV
RLTSESSQQN YHRIDHNYFG PRPILGSNGG ETLRIGTSHH SLTNSFTTIE NNFFDRCNGE
VEIISNKSGK NSIRNNVFFE SRGTLTLRHG NGNIVENNVF FGNGVDHTGG IRVINRDQII
RNNYLEGLTG YRFGSGLTVM NGVPNSKINR YHQVDNALIE NNTLVDVKHI QFAAGSDKER
SATPVNSLVR NNLILSEQGT DGITVFDDIS GITFEDNLLN QDTKATLEEG FKQAEITMKR
ADNGLLYPAD EAQRKFGVSS DIKPIAKNDV GVSWYPKVEP DVAFGSGTTI PVAPGDNTLF
DAIASAKSGD VLILQGGEYR VSKILKLDKT LTIRAQDNAA AVIYPQRSTL IEINNMGNLT
LDGVRVDAKN APDAAGNTLI RTTRLPMQRN YRVAIKNSTF ENLNINHSYH FFDVGNRSFA
DYIQVTNSHF SHITGDLFRL DKETDDLGIY NVEYLTIEDS TVTDLDGAIA KVYRGGTDES
TFGPHVVLNN NTFSEIGKGK RNKSKASLVL HGTQVNKVTA NKFINTAPVI FELTVGEPKT
WITDNVFEGT SEPIIKDLFP LSGVTTIISG NKTL
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