| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3652 |
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| Symbol | |
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| ID | 4175432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4405076 |
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| End bp | 4406230 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056682 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_663208 |
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| Protein GI | 109899953 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAG GCTGTTTAAA AGACAGAGTT TGCACGCTCA AGTTCAATTT ATGCAAGCGT
GCTAGCGCAA TAAAGTTAAA CATTTACACT TTGCATACTT TGCTAGAGGA AATGAAAGAC
AATGAGATTT GTGATAGTTA TATCGTAACG TTAGAAATTG GATCCATCAC TCAGATCATG
ACTCAAGTAA AAGAATCACA GCACGCGCAT ACTCATTCTG AGCAAGGACA TCCAGAACAT
GGGCATGCTC ACCATGGACA CTCTCATCAC GGTCACTCTC ATCACGGACA CCATCACTTC
GACCCTTCAT CAGATCGTAT TGGCTGGGCA TTTTTGCTCA ATGTCACCTT TACTATTATT
GAGTTCATTG GCGGCTGGTT AACCAACAGT ACCGCGATCA TGGCGGATGC CGTACATGAT
TTAGGCGATA GTCTGTCCAT TGGCACCGCT TGGTTTTTAC AGCGCGCGGG CAATAAACAA
GCGACAGCTC GATTTTCCTA CGGCTTTAAG CGACTGTCAT TGTTGGCTGC CATGCTTAAC
GGCGTGGTAC TGGTGTGCGG GTCGATATGG GTACTGATTG AAAGCATACC GCGCTTGTTT
GCCCCAGAAA TGCCCCACAC TGAGGGAATG TTTTTACTTG CCTTACTAGG CGTTGGCGTA
AATGGGTTTG CTGCTTACAA ATTAAGTGCA GGAAATACGC TGAATGAGCG CGTGCTAAAT
TGGCACTTAA TTGAAGATGT TATGGGTTGG GTAGCGGTGC TGATAGTGTC AGTGGTGTTG
ATGTTTGTTA ATTTGCCCAT TCTGGATCCG TTGCTTTCTA TCGCGTTTAC CTTATTCATT
TTGTATAACG TGGTGCGCAA CATTAACCTG ACCCTTGGGC TATTTTTACA AGGCGCACCC
GATGAACAGG TTCAACTGCA AATTAAACAA AGATTACAAC AAATAGCGTT TGTTGACGGT
ATACACCATC TACATTTTTG GTCATTAGAC GGTGAACAGC ACGTGTTAAC TGCGCATCTG
GTGTTGAAGC AATTACTGCA GCCTGAGCAA CTCGTGGCGA TTAAGTGTGA AGTGGCAGAG
TGCTTAAGCG AATACAAGCT TTCCCATACC ACTATTGAAT TTGAGTTTCC TGAGGAAGCA
TGCCGAGATG ACTAA
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| Protein sequence | MDKGCLKDRV CTLKFNLCKR ASAIKLNIYT LHTLLEEMKD NEICDSYIVT LEIGSITQIM
TQVKESQHAH THSEQGHPEH GHAHHGHSHH GHSHHGHHHF DPSSDRIGWA FLLNVTFTII
EFIGGWLTNS TAIMADAVHD LGDSLSIGTA WFLQRAGNKQ ATARFSYGFK RLSLLAAMLN
GVVLVCGSIW VLIESIPRLF APEMPHTEGM FLLALLGVGV NGFAAYKLSA GNTLNERVLN
WHLIEDVMGW VAVLIVSVVL MFVNLPILDP LLSIAFTLFI LYNVVRNINL TLGLFLQGAP
DEQVQLQIKQ RLQQIAFVDG IHHLHFWSLD GEQHVLTAHL VLKQLLQPEQ LVAIKCEVAE
CLSEYKLSHT TIEFEFPEEA CRDD
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