| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3593 |
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| Symbol | |
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| ID | 4175373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4326203 |
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| End bp | 4327054 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056623 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_663149 |
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| Protein GI | 109899894 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAC TTTCGTTGGA TAACTTACGC ACTTTTGTGA CCGTGATTGA TTTAGGCGGT
TACGCCAAAG CCGGTGAGTA CCTTGGGCGC TCGCAACCCG CCATTAGTCT GCAAATAAAG
CGTTTGGAAT CACAGCTTAA TAAACGCTTG TTCAGTAAAG CGGGGCAGCG CCACGAAGTG
AATCATGACG GGCTGAATTT GTACCATCAA GCGAAGAACA TGTTGGCGAT TAACGATGAA
ATATTCCGCC AATTTGAACC CGCATCGATT CGCGGACGAC TGCGTTTGGG GATACCAAGC
GAGTTTGCGA CCACACTACT TCCCAGCATT GTGGGTGAAT TCAGTAAATT ATACCCAGAT
GTGTCGTTAG AGGTGACTTC AGCGTTAAGC AAGTCGTTAC TCAGTGAAAA TCAGCGCCAA
GACTTTGATT TGATCATGGC ATTGTTGCCT CATAACCAAA CGGTTGATGG CGAATTACTG
CTGGATGATG ACTTGGTGTG GGTTGGCAAT CGAAACCAAA ACTTTACCAA TAACACCTTG
AGTTTGGTGC TCGCGCCTGA TGGCTGCATG TATCGAAGTC GCGTTATTCA AGCGCTAAAA
CAGCAAACTA CTCAGTGGCG TATTACCTAC ACTAACGCAG ATTTAGCCGG TATTACCGCT
GCGATAAACC AAGGTTTGGG CATAACCGCA CTGGCGCGAA GTAGTGTGCC GAAAGAGTTG
AATATTATTC GCCATGAAAT GCTACCCGAC TTAGGCAAAA TTCGTATTGC GCTGTTCAAT
CAAGCACAAC GCTACTGGCA AGCAAGCGAT AAATTGGCTG AGTTTATAAA GTCGCGTTTA
GGCGAAATGT AA
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| Protein sequence | MKQLSLDNLR TFVTVIDLGG YAKAGEYLGR SQPAISLQIK RLESQLNKRL FSKAGQRHEV
NHDGLNLYHQ AKNMLAINDE IFRQFEPASI RGRLRLGIPS EFATTLLPSI VGEFSKLYPD
VSLEVTSALS KSLLSENQRQ DFDLIMALLP HNQTVDGELL LDDDLVWVGN RNQNFTNNTL
SLVLAPDGCM YRSRVIQALK QQTTQWRITY TNADLAGITA AINQGLGITA LARSSVPKEL
NIIRHEMLPD LGKIRIALFN QAQRYWQASD KLAEFIKSRL GEM
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