| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3578 |
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| Symbol | |
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| ID | 4175358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4301753 |
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| End bp | 4303036 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056608 |
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| Product | threonine synthase |
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| Protein accession | YP_663134 |
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| Protein GI | 109899879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAACTAG TTAATTTAAA AGACCCTTCG GACAAAGTTA GCTTTGCACA AGCGGTTAAA
AAAGGGTTAG GCAAAAACCA AGGGTTATAT TTCCCTACTA GTTTGCCAAA ATTTGATGAT
ATCGATGCCA TTCTTGATAT GCCATTTGTT GAACGCTCGG TTGAAATTTT AAGCCAGCTG
ATTGGTGATG AAATCCCTAG AGATCGTTTA CAGGGCATCG TTGAGCGCGC TTTCGCATTT
GACGCGCCAT TGGCAAAAGT AACAGATAAT ATTTACAGCC TTGAGTTATT CCACGGTCCG
ACACTGGCGT TTAAAGATTT CGGCGGCCGC TTTATGGCTC AATGTTTAAC CGAAATTGCC
GCTGGCGAAA AAATCACCAT TTTGACTGCT ACCTCTGGTG ATACTGGCGC TGCCGTTGCT
CATGCATTCC ATGGTTTAGA TAACATCAAT GTGGTTATCT TATTCCCGAA AGGCAAAATT
AGCCCACTGC AAGAGAAGCT ATTCACCACC TTAGGTGACA ACATTCACAC TGTCTCGATT
GAAGATGACT TTGATGCATG TCAGCAAATG GTAAAAAGTG CGTTTGATGA TGTTGAAGTG
CGTGAAGGTT TGCACCTTAA CTCAGCTAAC TCCATTAACA TTAGCCGTTT AGTCGCGCAG
GTTTGTTACT ACTTTGAAGC CGTTTCTCAG CTAAGCAAAG AGCAGCGTGA TGATTTGGTT
ATCTCAGTAC CTAGTGGCAA CTTCGGTAAC TTGACCGCCG GCATGATTGC GAAAACCATG
GGCTTGCCTG TTAAGCACTT TGTGGCTGCT ACTAACTTGA ATGATACCGT GCCGCGTTAT
TTGAAAACCG GTGAGTGGGA TCCTAAAAGT ACCGTGGCGA CTATGTCTAA CGCGATGGAT
GTTAGCCAAC CAAATAACTG GCCGCGTATT GAAGCCATCA TCGAGCAAGG TTATTTGTCA
CGTGAAATAC TGTCAGGTGA CATGGTTGAC GAAGACTATA CCCAAGTGGC TATGCGTCAA
CTTGCCCAGT TAGGCTATGT GACAGAGCCT CACGCGGCGA TTGCTTACAA AGCACTGCTT
CGCCATATGG ATGAAGGCGA TACAGGGATA TTCCTTGGTA CGGCGCACCC TGCTAAGTTC
CGCGAAACGG TCGAAAACGT ATTGGGGCAA CCGATTAGTT TACCTCAACC TTTGGTTGAC
TGTTCTACCA AAGAAAGCTT TGCTGTGGAT TTACCAAGCG ATTATGACGT GTTGAAAAAG
CACTTGTTTA GCCTACTAGG CTAA
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| Protein sequence | MELVNLKDPS DKVSFAQAVK KGLGKNQGLY FPTSLPKFDD IDAILDMPFV ERSVEILSQL
IGDEIPRDRL QGIVERAFAF DAPLAKVTDN IYSLELFHGP TLAFKDFGGR FMAQCLTEIA
AGEKITILTA TSGDTGAAVA HAFHGLDNIN VVILFPKGKI SPLQEKLFTT LGDNIHTVSI
EDDFDACQQM VKSAFDDVEV REGLHLNSAN SINISRLVAQ VCYYFEAVSQ LSKEQRDDLV
ISVPSGNFGN LTAGMIAKTM GLPVKHFVAA TNLNDTVPRY LKTGEWDPKS TVATMSNAMD
VSQPNNWPRI EAIIEQGYLS REILSGDMVD EDYTQVAMRQ LAQLGYVTEP HAAIAYKALL
RHMDEGDTGI FLGTAHPAKF RETVENVLGQ PISLPQPLVD CSTKESFAVD LPSDYDVLKK
HLFSLLG
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