| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3531 |
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| Symbol | |
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| ID | 4175310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4238054 |
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| End bp | 4238983 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056560 |
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| Product | SMP-30/gluconolaconase/LRE-like region |
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| Protein accession | YP_663087 |
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| Protein GI | 109899832 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAGCCAA TAAATCAGTC AAAAGACGTG AGTTTATATC GCTGCTTAGC AGTGGAAAAC
GAATTAGGCG AAGGCGTCAT TTGGGATCCC AGGCAACGAT GTGCCTTTTG GACAGACATA
CTAGGCAAAC AATTCTATCG CTGGGATTTT GATAACAAGG TGACTCAATA CCCCTGCCCT
GAAAGATTAT GTTCTTTTGG CTTAACCCCT GAGCCAGATT GGTTTATCGC TGCGTTTGAA
ACGGGTTTTG CATTTTTTAA TCCGATTGAA CAAGACATCC AATGGATAAG CAAAATAGAA
GCCGATTTAC CTTACACTCG TATGAATGAC GGCAAAGTTG ACCGTCAAGG GCGTTTTTGG
GCCGGCTCCG TCATCGAAGA TGACAGTGTG GATGTCTCCA CACTTGCAAA CGACCAACAA
GCCAAACTTT ATCGCTTAGA CGCTAATGGC CAAGCGCGCA CTATGTTAGA TGGCATTTCC
ATCGCCAATG GGCTGGCGTT CAGCGCCGAC AGTAAAACAA TGTATTTCGC TGATTCAGCT
AAGCAACAAG TATGGCGCAG TGATTTTGAG TCTGAATGTG GCACGCCAAG TCAATTGGAG
CATTTTTTTG CTACAACAGG CAACGCATTT CCAGATGGCT CGTGCATTGA CAATCAAGGT
TACCTTTGGA ATGCTCAGTG GGGAAGCGCT TGTGTAAAAC GATACTCCCC ATCAGGAACA
CTAGATTTCA CCCTCCCCGT TGATTGCCAA CAGCCGTCAT GCGTAAGCTT TGGCGGCCCA
GACCTTAATC ATCTAATTAT TACATCAGCA CGTGAGGGGC TATCTCGTGA GGATGATGAA
ATCTATAAGC ACAATGGGGC GGTAATGATT TATCACACAC CGTTTAAGGG AATAGCGGAG
CCAATATGTA CAGTGCCTCG GCGGCAATAA
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| Protein sequence | MKPINQSKDV SLYRCLAVEN ELGEGVIWDP RQRCAFWTDI LGKQFYRWDF DNKVTQYPCP
ERLCSFGLTP EPDWFIAAFE TGFAFFNPIE QDIQWISKIE ADLPYTRMND GKVDRQGRFW
AGSVIEDDSV DVSTLANDQQ AKLYRLDANG QARTMLDGIS IANGLAFSAD SKTMYFADSA
KQQVWRSDFE SECGTPSQLE HFFATTGNAF PDGSCIDNQG YLWNAQWGSA CVKRYSPSGT
LDFTLPVDCQ QPSCVSFGGP DLNHLIITSA REGLSREDDE IYKHNGAVMI YHTPFKGIAE
PICTVPRRQ
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