| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3490 |
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| Symbol | |
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| ID | 4175269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4190417 |
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| End bp | 4192045 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056519 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_663046 |
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| Protein GI | 109899791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAC GCGACTTTAT TAAACTAGGC AGTGCCGGTA TGGGCACCCT AATACTACCT
ATATCGGGGG CGGCGATTTC AGCCGATCAA CTTCTCGATA AACCGATGGA CGTAGCCTAT
AAAAAGAAGC TTGCCGATAT CGCTTTAAAT GCTGCCAAAG CAAAAGGCGC CACATACGCC
GATGCCCGCA TTGGCCGCTA TTTAAATCAA TTTGTGACTA CCCGCGAAAC CCGTGTCGAT
AATATCGTTA ACACAGAATC AGCTGGTATA GGTGTGCGTG TTATTGCGAA CGGCACATGG
GGCTTTGCGT CTACGTCAAA CATGACACCA GATAGCGTCG CTAAAACCGC TGAACAAGCG
GTTGCCGTTG CCATGGCTAA CTCTAAATTT CAAACTACGC CGGTACAACT TGCCCCTGTA
AAAGGTGTGG GTGACGTCAG TTGGCAAACC CCCATCGTTA AAAATGCCAT GGAAGTGCCC
ATTCAAGACA AAGTGGATTT ACTGTTGTCA GTGAACGATG CGGCGATGAA AAATGGCGCA
AGCTTTATTA GCTCACGTTT ATTCTTAGTC AACGAACAAA AATATTTTGC CTCCACTGAT
GGCTCATATA TCGACCAAGA CATTCATCGC TTATGGGCAC CTTTTACTGC CACAGCGGTA
GGTAAAGATG GTTTCAAACA ACGCTCAGCA TTAGGTAATC CTGTCGGTAT GGGGTATGAA
TACCTAGACG GTTTAGAAAA AGACAAAGTG CGCATTCAAG GCGCAAATGT TGGCTACCAT
AATTCCTACG ATATGGTTGA AGATGCCGCA GCCGCTGGTA AACAGCTGCA AGCCAAACTA
AAAGCAAAAT CCGTAGAGCC AGGTAAGTAC GACCTGGTGC TAGACCCTGC GCATTTAATG
CTAACCATTC ATGAATCGGT TGGTCACCCG TTAGAACTTG ACCGCGTGCT GGGCTATGAA
GCGAACTACG CAGGCACTAG TTTCGCGACA TTGGATAAAT GGAAAAGCGG CAACTTCCAG
TACGGCTCAG ACATCGTTAA TTTGTATGCT GATAAAAATC AGCCGCACAC CCTAGGTAAT
GTGGCGTTTG ATGATGAAGG CGTTAAAACC AAAGAATGGG ATTTGATCAA AGATGGTGTC
TTAGTGAACT ATCAAGCCAC ACGCGACCAA GTACATATGC TCGGGCAAAA AGAGTCCCAC
GGTTGCAGTT ATTCACAAAG CTGGCGCGAT GTGCAGTTCC AACGTATGTC GAATGTATCG
CTACGTCCAA ATGAGAAAGA CTTATCAGCT GACGACGTAA TTAAAGACGT TGAAAAAGGC
ATTTATATTG CTGGGCGCGG CTCTTACTCT ATCGACCAGC AACGTTATAA CTTCCAGTTT
GGCGGGCAAT TATTTTACGA AATTAAAGAC GGCAAGATTG TCGATCAAAT TGAAGATGTG
GCTTATCAAT CTAACACCCA AGAATTTTGG AATAGCTGCA GTCAGTTAGC TGGCAAATCA
GATTACAGAG TGGGCGGTTC GTTCTTTGAT GGCAAAGGCC AGCCTTCACA AGTGAGCGCA
GTTTCTCATG GTTGCCCTAC CACGAGGTTC GACAACATTA ACGTGATTAA CACAGCGCGC
AACGTTTAA
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| Protein sequence | MERRDFIKLG SAGMGTLILP ISGAAISADQ LLDKPMDVAY KKKLADIALN AAKAKGATYA
DARIGRYLNQ FVTTRETRVD NIVNTESAGI GVRVIANGTW GFASTSNMTP DSVAKTAEQA
VAVAMANSKF QTTPVQLAPV KGVGDVSWQT PIVKNAMEVP IQDKVDLLLS VNDAAMKNGA
SFISSRLFLV NEQKYFASTD GSYIDQDIHR LWAPFTATAV GKDGFKQRSA LGNPVGMGYE
YLDGLEKDKV RIQGANVGYH NSYDMVEDAA AAGKQLQAKL KAKSVEPGKY DLVLDPAHLM
LTIHESVGHP LELDRVLGYE ANYAGTSFAT LDKWKSGNFQ YGSDIVNLYA DKNQPHTLGN
VAFDDEGVKT KEWDLIKDGV LVNYQATRDQ VHMLGQKESH GCSYSQSWRD VQFQRMSNVS
LRPNEKDLSA DDVIKDVEKG IYIAGRGSYS IDQQRYNFQF GGQLFYEIKD GKIVDQIEDV
AYQSNTQEFW NSCSQLAGKS DYRVGGSFFD GKGQPSQVSA VSHGCPTTRF DNINVINTAR
NV
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