| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3480 |
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| Symbol | |
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| ID | 4175257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4178588 |
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| End bp | 4179454 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638056507 |
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| Product | formate/nitrite transporter |
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| Protein accession | YP_663036 |
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| Protein GI | 109899781 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTATT TATTACCATC AGAGTTTGCC ACCAAAATGG TAGACGCAGG GGAAGCAAAG
ATATTCATGT CAACACGGGA TACCCTCATT CGTGCTTACA TGGCAGGCGC TATATTGGCA
TTGGCGGCAG TATTTGCCAT CACTATCGCG GTACAAACAG GGGTGTTTTT GATCGGTGCA
ATCTTGTTCC CGGTGGGTTT TTGTATGCTT TATCTTATGG GCTTTGACTT ACTAACAGGT
GTATTTGTTT TGACGCCATT GGCATTGCTC GATAAACGGC CCGGCGTCAC CATTCAAGGT
GTATTGCGCA ACTGGGGATT AGTCTTTATC GGTAATTTCT GCGGTGCGTT AACCGTTGCT
ATCATGATGG CGTTTATTTT TACGTATGGT TTTAACACTG ACCCAGGTGC TATTGGTAAG
AAAGTCGCAT CAATCGGCGA AGCGCGTACC TTAGGTTACG CTGAGTTTGG TACTGCTGGT
TGGTTCACTA TTTTCATTCG CGGTATGCTG TGTAACTGGA TGGTGTCATT AGGCGTGGTG
GGTGCAATGA TCTCAACTCA CGTAAGCGGT AAAGTTATCG CCATGTGGAT GCCTATCTTC
TTGTTCTTCT TTATGGGCTT TGAGCATTCC GTGGTTAACA TGTTCTTATT CCCTTTCAGC
ATCATCTTAG GTGGCGATTT CTCGGTGATG GATTACCTAG TATGGAATGA AATTCCAACG
GCCCTTGGTA ACTTAGTCGG TGGTTTAGCC TTTACTGGAT TAACCTTGTA TAGCACGCAC
GTGCGTACCG GTAAAAAACG TGATTTGCCT TATAGCAAAC GCTCTGACGT AGCTGCAAGC
TCAGTCGCTG AGCATGCATC TCGCTAA
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| Protein sequence | MAYLLPSEFA TKMVDAGEAK IFMSTRDTLI RAYMAGAILA LAAVFAITIA VQTGVFLIGA
ILFPVGFCML YLMGFDLLTG VFVLTPLALL DKRPGVTIQG VLRNWGLVFI GNFCGALTVA
IMMAFIFTYG FNTDPGAIGK KVASIGEART LGYAEFGTAG WFTIFIRGML CNWMVSLGVV
GAMISTHVSG KVIAMWMPIF LFFFMGFEHS VVNMFLFPFS IILGGDFSVM DYLVWNEIPT
ALGNLVGGLA FTGLTLYSTH VRTGKKRDLP YSKRSDVAAS SVAEHASR
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