Gene Patl_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3463 
Symbol 
ID4175240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp4154948 
End bp4155550 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content42% 
IMG OID638056490 
Producthypothetical protein 
Protein accessionYP_663019 
Protein GI109899764 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.286648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAA AAATTATGCT ACTGGTCGTC CAAGGCTTGT TAGCTGTGGT GCCTATAACA 
TTGACTGTTT ATGCATTGTA TTGGCTGGTA ACAACCGTGG AGTTGGCGTT AACGCCGATC 
ATACCTGCTC AATGGTACTT CCCAGGCATG GGGTTAGTGA CAGGCATTGT GTTGTTGTTT 
TTCGCAGGTT TATTAGTCAA CGCTTATGTG GTTAAAGTAC TACTGCATTG GGGCGAGCGG 
GTTTTCGAGC GCATTCCATT GGTAAAAACT TTTTATGGCG CCATTCAAGA TGCCGTAAAC 
CTAATCAATG TGGGTAAGCA ACAAAAGATG CAAAGCGTTG TGTCGGTACA AATTAGCGAC 
AGTATTGATT TAATTGGTTT TGTGACCAAT GCCGAAGGTG GAAAAACGTT ATTTAACGAT 
GCGCAAAAAG TCGGCGTTTA CATTCCTCTT AGTTACCAAA TAGGTGGCTA TACCTTATAT 
ATAGACAAAA CTAAAGTAAC CCCACTGGAT ATAGACGTAG AAACTGCTAT GCGTATTGCG 
CTCACTGGTG GCAGCCAATC CAAGAACGAA AACGGATTTA AAAAGCAAAA ACTCCCTCAA 
TAA
 
Protein sequence
MLKKIMLLVV QGLLAVVPIT LTVYALYWLV TTVELALTPI IPAQWYFPGM GLVTGIVLLF 
FAGLLVNAYV VKVLLHWGER VFERIPLVKT FYGAIQDAVN LINVGKQQKM QSVVSVQISD 
SIDLIGFVTN AEGGKTLFND AQKVGVYIPL SYQIGGYTLY IDKTKVTPLD IDVETAMRIA 
LTGGSQSKNE NGFKKQKLPQ