| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3446 |
|---|
| Symbol | |
|---|
| ID | 4175223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 4137367 |
|---|
| End bp | 4137651 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056475 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_663004 |
|---|
| Protein GI | 109899749 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2944] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTT TTGATGAATT GAAAGCGTCT CTCGAAGAGG CTGTTGTTAT CGAGCAAGGG
CAAAGGAAAG CTGCTCGTGT GACCTCTTAT GAGGTTGCAG ATGTTAAAGC TATTCGTGCT
CAACTAAATG TTTCTCAAAT AGAATTTGCC GCAGTACTGG GCACGAGTGT CGATACCATC
AAAAGCTGGG AAAAAAGACG TCGTAACCCA ACAGGACTAG CAGCAAAGGT GCTAGCAACA
ATTAAAGACA ATCCGGCGGT ATATCAGGAA TTAGCAAGAC ATTAG
|
|---|
| Protein sequence | MSVFDELKAS LEEAVVIEQG QRKAARVTSY EVADVKAIRA QLNVSQIEFA AVLGTSVDTI
KSWEKRRRNP TGLAAKVLAT IKDNPAVYQE LARH
|
|---|
| |