| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3433 |
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| Symbol | |
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| ID | 4175210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4116453 |
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| End bp | 4117019 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056464 |
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| Product | peptide deformylase |
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| Protein accession | YP_662993 |
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| Protein GI | 109899738 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAA TTGCACAAGT GGGTGAAGTT ATCTTGCGTA CGCCAGCCAA ATCAGTCTCC
CAGACAGATA TTGAAACCGG TGCGTTTCAG GAGTTTGTTG ATGCCTTACT CGCGACCATG
CAAGAGGCCA ATGGGGTCGG TATTGCAGCA CCGCAAGTAT TTGATGAGCG TGCAGTCATG
ATCATTGCAT CACGGCCCAG CCCTAGATAC CCAAATGCAC CTGACATGGA ACCTTTGGTG
TTAATTAACC CCAAAGTGAT ACAAAGTAGC GAGGAAACAG TAAAGGACTG GGAAGGCTGT
TTGTCTGTGC CTGGTTTACG TGGTTTTATT CGCCGGGCGA CTTGGGTTGA GATAGAGTAT
CTGCAACGCG ATGGAACACC GGCCACTCAG CGCTTAGATG GGTTTGTGGC ACGCATTTTC
CTACACGAAT TCGATCATCT GATTGGTAAA ACGTGGCTTG ACCATGTTGA ACTTAACACC
GATATTATGG CTGAATCCGT ATGGCGCAGA AAAATAGCAG GCATTGATGA CCGACAAAGC
GAAATCAAAA ACGACGATAA TCGTTAA
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| Protein sequence | MMKIAQVGEV ILRTPAKSVS QTDIETGAFQ EFVDALLATM QEANGVGIAA PQVFDERAVM
IIASRPSPRY PNAPDMEPLV LINPKVIQSS EETVKDWEGC LSVPGLRGFI RRATWVEIEY
LQRDGTPATQ RLDGFVARIF LHEFDHLIGK TWLDHVELNT DIMAESVWRR KIAGIDDRQS
EIKNDDNR
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