| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3429 |
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| Symbol | |
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| ID | 4175206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4110367 |
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| End bp | 4111443 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056460 |
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| Product | strictosidine synthase |
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| Protein accession | YP_662989 |
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| Protein GI | 109899734 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGG TTAAATTTGC CCTACTCGCT ATTTTTGCCC TTAGCGCGTA TTTACTGCTA
TGGCCTGTCG CTATTGATCC AGTCGCTTGG CAAGCGCCCA CAGCCACAGG GTATGTTGGC
CCATGGGCAT CAAACAATGC ATTAGCCGAC TTAGATCTAT TGTCGTTAGG TGACCATCAT
GGGCCTGAAG ATTTTGCCCT TCGAGATGAT GGTGTTATCG CCACAGCTAC CCATTCGGGA
GATATCATGC TGCTGGCACC CAACACCAAC GAATTTAAAA CTTGGGTCAA TACAGGCGGT
CGCCCACTAG GAATCGAGTA TGACCTACAA GGGAATCTAT TGGTTGCCGA CGCGATGAAA
GGATTAATAT CCATAACCCC CAATGGTGAT ATCAGCCTTG TCACAAATCA GGTAGACGAT
ACCGATATTG TATACGCGGA CGATGTAGAC ATCGCACAAA ATGGTATGGT CTATTTCAGC
GATGCCACAA ACAAGTTTTC TGCCTCGCAA TTCGGCGGCA CATTACCCGC AAGTCTGCTG
GAAATAATGG AACACAAAGG CAATGGACGC CTCTTGCAAT ACAATCCAGC CACTGCCGAA
ACTAGGGTAT TACTGGAAGG CTTAACCTTT GCCAATGGTG TCGCGGTGAG TCACGATCAA
CGCTCGGTGC TAATCAATGA AACCGGCAGT TACCGTGTAT TACGCTATTG GCTGAAAGGC
CCAAAGGCCG GCAAAGTTGA GACCCTTATT GATAACCTAC CGGGATTCCC TGATAACATC
GCCCGCTCTC CTAGCGGTGG ATATTGGCTC GGGTTTGCCT CCCCTCGCGC CAAAAGCATA
GATGACTTAT CTGAATCACC CTTTCTAAGA AAAATGATTC AACGTCTGCC CAGCTTTTTG
CAACCAGCAG GCAAAGATTA TGGCCATGTC ATTAAAATTG CCGAAAATGG TGAGGTACTG
ATGAACTTAC AAGACCCTAG TGGTGCGTAT CCCTTTACTA CTGGCGTGCT AGAAACGGCT
GACGCTTTAT ATATCAGTAG CCTTACGGCT GATGCAGTCG GTAGAAGGTC GATTTAA
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| Protein sequence | MKLVKFALLA IFALSAYLLL WPVAIDPVAW QAPTATGYVG PWASNNALAD LDLLSLGDHH
GPEDFALRDD GVIATATHSG DIMLLAPNTN EFKTWVNTGG RPLGIEYDLQ GNLLVADAMK
GLISITPNGD ISLVTNQVDD TDIVYADDVD IAQNGMVYFS DATNKFSASQ FGGTLPASLL
EIMEHKGNGR LLQYNPATAE TRVLLEGLTF ANGVAVSHDQ RSVLINETGS YRVLRYWLKG
PKAGKVETLI DNLPGFPDNI ARSPSGGYWL GFASPRAKSI DDLSESPFLR KMIQRLPSFL
QPAGKDYGHV IKIAENGEVL MNLQDPSGAY PFTTGVLETA DALYISSLTA DAVGRRSI
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