| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3408 |
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| Symbol | |
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| ID | 4175185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4080643 |
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| End bp | 4081755 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056439 |
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| Product | alkaline phosphatase D domain-containing protein |
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| Protein accession | YP_662968 |
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| Protein GI | 109899713 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAT TAAAAATTGA TTATAAATAT ATGAAAAGCC GAATTCAGAT GATACCTCTC
ATGTCACTTA TTGCGACGCT TGCCCTAGTT AGCCTAAGTG CGTTAGCTGA GCAAAAAACG
TCACCACAAA TGAACCCCAG TCGCCAGAGC TTTAAAGTGG TCGTTGGCTC GTGCTTGCAT
CAAGACAAAG TCCAGCCAAT TTGGCAGCCT ATGCTACAAG AGCATGCCGA CCTATTTATG
CTCCTCGGTG ACAATATTTA CGGTGATACT GAAGACATGG CTGAACTAGA AGCAAAGTAT
AAAAAACAAT GGTCAACGCC TGGCATGCAA AAAATGCTAG CGAGCACGCC AACCATTGGT
ATATGGGATG ATCATGATTT TGGTGAAAAT GATGCAGGCA AAGCATATCC ACAAAAAGAG
GCTTCTCGGC AGATTATGCT CGACTATTTT AATGAGCCAA AAGATAGTAT TAGGCGCCGC
CGAGATGACG GTATTTATAC CAGTTACTTT TATGGTGACA CTCCCCATCG GGTGCAAGTC
ATCATGCCAG ATTTACGCTG GAATCGAGAC GATTTAAAAC ACGTGACTCG CGTAGAATAT
ATGCTGAAGA AGAAACCGAA CAACCAGGGG CCTTATGTGC CGCATACTGA TCCTAGCCAC
AAAATGCTGG GTGATAAGCA GTGGGCATGG TTAGAGGAGG AATTACAAAA ACCAGCTGAT
GTGCGCATTT TAGCTTCAAG TTTGCAGCTT TTACCCGAAT TTAGTGGCTG GGAGTCTTGG
GCTAACTTTC CCCAAGAGCG CCAGCGCTTA CTCAGCATGT TAGATTCTTT GGAGATTAAC
AATTTAGTGA TTGTCAGTGG CGATACGCAT TGGAGCGAAC TGAGCCAAGT TAGGCGAAAA
AGTGGCACAT CGTTATGGGA GATGACCTCG TCAGGCTTAA CAGAAGAGTG GAAACAAGTT
AGCCCGAATA AACACCGTGT GGGTAGCAGT TTTTCAAAAG CAAACTACGG CGTATTGGAC
ATCCAATTTG ACGAAAAGGC AGTGCGCGTC ACCATGAGTG TAAAAGACGA TACTGGCGAA
GTGAAAATGC AGCAGGCGCT GTCACTGCAT TAA
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| Protein sequence | MKLLKIDYKY MKSRIQMIPL MSLIATLALV SLSALAEQKT SPQMNPSRQS FKVVVGSCLH
QDKVQPIWQP MLQEHADLFM LLGDNIYGDT EDMAELEAKY KKQWSTPGMQ KMLASTPTIG
IWDDHDFGEN DAGKAYPQKE ASRQIMLDYF NEPKDSIRRR RDDGIYTSYF YGDTPHRVQV
IMPDLRWNRD DLKHVTRVEY MLKKKPNNQG PYVPHTDPSH KMLGDKQWAW LEEELQKPAD
VRILASSLQL LPEFSGWESW ANFPQERQRL LSMLDSLEIN NLVIVSGDTH WSELSQVRRK
SGTSLWEMTS SGLTEEWKQV SPNKHRVGSS FSKANYGVLD IQFDEKAVRV TMSVKDDTGE
VKMQQALSLH
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