| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3407 |
|---|
| Symbol | |
|---|
| ID | 4175184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 4080148 |
|---|
| End bp | 4080534 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638056438 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_662967 |
|---|
| Protein GI | 109899712 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5395] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATATG TACAACTTGC CTACTTTCAC CTCGCCACTG TAGTACCGGC TTTTTTGATT
GGCACCTATT TATTGGCCAA TCGCAAGGGC ACACCAACCC ATCGCCTGTT GGGTAAAATA
TATATGAGCT TGATGCTCAT TACTGCCATT ATCACGCTTT TTATGGCCGC TGTGGTGGGC
CCCGTACTGA TTGGCCACTT TGGATACGTA CACCTGTTTA GTCTGCTAGT ACTATACGCC
GTACCGAGTG CCTATTTCGC TGTACGAAAA GGGAATATTG CGAAGCATAA ACGCAGTATG
ATCCTGCTTT ATGTGGGGGC AATTTTGATT GCCGGGGGCT TTACCTTTAC CCCGGGCAGA
ATGATGTATG ACTGGTTTAT AGCTTAG
|
|---|
| Protein sequence | MTYVQLAYFH LATVVPAFLI GTYLLANRKG TPTHRLLGKI YMSLMLITAI ITLFMAAVVG
PVLIGHFGYV HLFSLLVLYA VPSAYFAVRK GNIAKHKRSM ILLYVGAILI AGGFTFTPGR
MMYDWFIA
|
|---|
| |