| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3399 |
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| Symbol | |
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| ID | 4175176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4073360 |
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| End bp | 4074397 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638056430 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_662959 |
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| Protein GI | 109899704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTAA GTGACACCTT CATCAGCGAT TGGCTACCAG TTGTATTGAC CTTGGTTTTC
TTTGGTTTGC TGACCTGGCT AGCGCAAATT TTTCTGTTCA ATAAACTTAA ACACACTGGA
GACGAAAATA TTTTTGCCCG TCAGCTTGGC ATGTTAATGC TAATGTTGGT TGGCCTAGTC
ACCGTGGTGA TCATGCTGCC CATATCTGAA AGTTTAGAGC TACAGATTTT AAGCTTAATC
GGTTTATTAC TGTCTGGTTT ACTCGCCTTC TCCTCTACCA CCTTGTTCAG CAATTTAATG
GCAGGAGCGT TATTGCGCTT CACTCAGCCG TTTCGCACTG GAGACTTTAT TCGTTTTGAC
AGTAATTTTG GCCGGGTGAC TGAACTGGGC TTGTTTGATT GTGAAATTCA AACGCAAAAC
CGAGAGTTAG TATCGATTCC AAACAGCTTA CTGATCAATA AACCGGTTAG CGTAATCCGC
CGCTCAGGCA CCATCATAAG TGTTGAGTTG TCATTGGGTT ACGATCTGCA TCACAGCAAA
ATTGATGAGC TACTATTGCA AGCCGCAAAA CAAGCCGGAC TAGAAGACCC ATTCGTGCAT
ATCACCCAAT TGGGCGATTT TTCGGTCAGT TATCGCGTTA GTGGCTTGTT AGTAGAAGTG
AAAAACCTAC TGACGGCTCG CTCAAACTTA CACCGCCACG TACTTGATTG CCTTCACGAT
AATGACATTG AAATTATGTC GCCGAATTTT GTTAGCCAAC ATGCGGGCCC AGATGTGGAG
CGAAAAATTG CCCACTCCCC CGCATTTAAT CAAGTACAAA CAGAGTCCAC CGCAGAAGAC
ATCGCATTTG ATAAAGCCGA GCAAGCTCAG CAACAAGCCA ATGATAAAAT TGAGACATTA
GCAAAAATAA AAAGTTTAGA AGAGCAACTT ACCCATGCCG AGAAAGACCA ACGTCAAGCG
ATAGAAAAGA GCATTGACCA ACTAAAACAG AAATTGGCCG AAATCAAAGA TGTCGTAGAC
GTACCTGAGG ATGAATAA
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| Protein sequence | MPLSDTFISD WLPVVLTLVF FGLLTWLAQI FLFNKLKHTG DENIFARQLG MLMLMLVGLV
TVVIMLPISE SLELQILSLI GLLLSGLLAF SSTTLFSNLM AGALLRFTQP FRTGDFIRFD
SNFGRVTELG LFDCEIQTQN RELVSIPNSL LINKPVSVIR RSGTIISVEL SLGYDLHHSK
IDELLLQAAK QAGLEDPFVH ITQLGDFSVS YRVSGLLVEV KNLLTARSNL HRHVLDCLHD
NDIEIMSPNF VSQHAGPDVE RKIAHSPAFN QVQTESTAED IAFDKAEQAQ QQANDKIETL
AKIKSLEEQL THAEKDQRQA IEKSIDQLKQ KLAEIKDVVD VPEDE
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