| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3382 |
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| Symbol | |
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| ID | 4175159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4056106 |
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| End bp | 4057302 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056413 |
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| Product | major facilitator transporter |
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| Protein accession | YP_662942 |
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| Protein GI | 109899687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCC GCGCAGCTAC GTCTGTCATC TTTGCTGGGT TTTTCTTTCT TGGCATGGTG
TTTATTTTAT GGGGAGTATT GTTGCCAGAC TTGGCTGAGA GTCTGGCGAT GAGTGAGGTG
ATAAGTGGTG CCTTTTTTAC CTTAATCTCT ATCGGTATGA TCCTCGGTGC TATCTTGGGT
GGTAAATACG CGCAGAAGTT TGATTTTATG TCACTCTTTG CCGTATTGCT TGTGTGCGTT
TTGGTACTAC TGCTTGCTAT CTCATTTGTG CAGCATTGGT TCTGGTTGTT AGTAGGAGCG
CTAGTGCTGG GCATGTTTGC TTCGAGTCTA TTTACCATAG GTCATACAGT TATTGCTCGC
TTACATGCTC ATAAGCGCTC AGCGATGATG GGCTTTATGG ACTTCATGTT TAGCCTAGGC
ACATTGGCCG CACCATTTTA TGTCTCTGGC TTGTACTTAA TAGAACACGA TTGGCGCTGG
CCGCTACGTA TTCTAGCTGC CGGTTTACTT TTGTTAGCCG GATATACCTG GCGCGTAGCA
CATCAAGGCA AAAAACTGGT GGCGCCTGAA GAGGCTAAAA AGAATCGCAA AAGCCTGTCT
TATGGCGACA TTATTCGTCG CCCCGTCTTT ATATTTCTAG CCCTTGCTGC ATTTGGCTAT
GGCATGGTGG AGTTTGGTAA CGCTAATTGG TTTGTAAGTT ACGCACAGAA TGGCCATGGC
TTTAGCGGTG AGCAATCACG TTTAGTGTTC GCTTTTTTTA CCGCGGGTAT GGTGGTGAGC
CGCCTTGTAT TTGCGCTGTT ACTAAAGTGG TTAACCTCAC ACAGATTGAT GCTGATTTTG
GCGACTATCA TGGTCGCTGG CTGCTTTATG ATCAAGCTCG CGGTTGACCC TGTAGTGATG
TCGTGGGGGA ATTTCATGTT GGGATTAGGT TTAGGCGGCT TATTCCCGCT TATGCTGTCG
GCTGCAATGG ATGTGGACAG CGATAAAGGG CCAATTATTT CAGGTTTATG CGTTATTGGC
TCCTCTATTG GCGTACAGGT AGCATCTTTC AGTACAGGCT TGTGGGCACA TTTCGCCCCT
TTAACCACCG CCTTTTGGGT TATCCCTATC GGTGGTGCTT GGCTATGGTG TATGGCGTGG
GCTTATAGCC GTTTCATAAA AAGACATATC GCATCAAGCA AGGTTGATGT TAATTAA
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| Protein sequence | MDRRAATSVI FAGFFFLGMV FILWGVLLPD LAESLAMSEV ISGAFFTLIS IGMILGAILG
GKYAQKFDFM SLFAVLLVCV LVLLLAISFV QHWFWLLVGA LVLGMFASSL FTIGHTVIAR
LHAHKRSAMM GFMDFMFSLG TLAAPFYVSG LYLIEHDWRW PLRILAAGLL LLAGYTWRVA
HQGKKLVAPE EAKKNRKSLS YGDIIRRPVF IFLALAAFGY GMVEFGNANW FVSYAQNGHG
FSGEQSRLVF AFFTAGMVVS RLVFALLLKW LTSHRLMLIL ATIMVAGCFM IKLAVDPVVM
SWGNFMLGLG LGGLFPLMLS AAMDVDSDKG PIISGLCVIG SSIGVQVASF STGLWAHFAP
LTTAFWVIPI GGAWLWCMAW AYSRFIKRHI ASSKVDVN
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