Gene Patl_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3325 
Symbol 
ID4175102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp3989114 
End bp3989707 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content44% 
IMG OID638056356 
Producthypothetical protein 
Protein accessionYP_662885 
Protein GI109899630 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.453276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGACC TTTCTGCTCA AATCTCTTTT ATGCTCGAAA TAGACAAACT TAAAGCGGTG 
TATCGCAAGA CGGTTGTTGA AGCCGACGAT AATCGTCAAG AAAATAGCGC CGAGCACAGT 
TGGCACATTG CACTGTTAGC AAACGTTATG GTGGAATACG CGGACGAGCC CGTAGATATA 
TTACGCGTGA CTAAAATGCT GCTTATTCAC GATATTGTTG AAATAGACGC TGGGGATTTA 
TTTGCCTTTG CAGACGAGCA AGATCATCAA GCGCAAGAAC AAAAAGAACT GGAAGCTGCC 
AAACGTATCT TCGGCCTGTT ACCCAAGCAT ATAGGGCAAA GCATGTTAGA TATGTGGCTC 
GAATTTGAGC AAGCCCACAC CGCAGATGCA AGATTCGCCA AAGGCATGGA CAGAGTCTTG 
CCTGTGTTGC AGAACATGAG TAATCAAGGT GGCAGTTGGA AGGTAAATCA CGTTAAGAAA 
AGCCAAGTGC TTAAACGAAA TACCTATTTG CAAGATATTG CGCCTAAGCT ATGGGAGTAT 
GTATTAAGCC AAGTGGATAT AGCGGTGGAA AAACAGTGGT TACTGGACGC TTAA
 
Protein sequence
MHDLSAQISF MLEIDKLKAV YRKTVVEADD NRQENSAEHS WHIALLANVM VEYADEPVDI 
LRVTKMLLIH DIVEIDAGDL FAFADEQDHQ AQEQKELEAA KRIFGLLPKH IGQSMLDMWL 
EFEQAHTADA RFAKGMDRVL PVLQNMSNQG GSWKVNHVKK SQVLKRNTYL QDIAPKLWEY 
VLSQVDIAVE KQWLLDA