| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3293 |
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| Symbol | |
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| ID | 4175070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3952408 |
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| End bp | 3953121 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056324 |
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| Product | LrgB-like protein |
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| Protein accession | YP_662853 |
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| Protein GI | 109899598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1346] Putative effector of murein hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAACA ATTACAGCGA GCAATACCCT CTCGTCTCTG CGTTGATGTG GACGACCATT
ACCGTGGGCG TGTATTTGCT TTCATTGACC GTTTTTCGCC TATTAGGGCG ACGTCCGGCA
TTTCATCCAA TGATCTTTTG CATTGCCATG CTCGCGGTTG TGCTCTTCTA TGCTGGCGTC
ACTGTTGAAT CATACCAAGG AGATACGAGC CTGCTGACGT GGTTGTTAGG CCCAGCGACA
GTGGCGTTGG CCGTTCCTCT CTACAGTCAA ATAAGAAGTC TTCGCGGAAA TGGCCTAGGC
ATTATGCTGC CGATTTTGAT TGGTGGTGCC ATTGCGCCTA TTTTGGCTCT GGCCGGTTTG
TATTTTGTGC CTTTGGACAG CGACGTAAAG TTAAGCTTGC TGACCAAGTC GATTACAAGT
CCATTGGCGA TTGAGACCAG TCAACATATT GGCGGTATTC CTGGGCTTGC AGTCGTGATT
GTTATTTTCA CTGGCATAGT GGGGGCTGTA TTTGGCTCCA TAACGTATCG CATATTTCGC
GTCACGTCCC CTCAAGCGCA AGGACTTGCT TTAGGTACTG TAGCCCACGC TATAGGCACT
GCTCAAGGAT TTCAGATGAG TCAGAAAATA GGTGCATTTG CCACCATAGG TTTGTGCATA
AATGGGGTAC TAACGGCCAT TATTCTGCCG ATTATTTTTT TTCTTATCAG CTAG
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| Protein sequence | MLNNYSEQYP LVSALMWTTI TVGVYLLSLT VFRLLGRRPA FHPMIFCIAM LAVVLFYAGV
TVESYQGDTS LLTWLLGPAT VALAVPLYSQ IRSLRGNGLG IMLPILIGGA IAPILALAGL
YFVPLDSDVK LSLLTKSITS PLAIETSQHI GGIPGLAVVI VIFTGIVGAV FGSITYRIFR
VTSPQAQGLA LGTVAHAIGT AQGFQMSQKI GAFATIGLCI NGVLTAIILP IIFFLIS
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