Gene Patl_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3289 
Symbol 
ID4175066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp3948513 
End bp3949169 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content47% 
IMG OID638056320 
ProductDNA methylase N-4/N-6 
Protein accessionYP_662849 
Protein GI109899594 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAT TCCAGCAAGA TGCCGTTGAA TGGTTGCAGA GCTTACCAGC CAACAGCGTT 
GATTTGGTCA TTACCGACCC GCCTTATGAA TCGTTAGAAA AGCATAGAGC CAAAGGCACG 
ACTACTCGTT TAAAGCACAG TAAATCTTCA AGCAACGAGT GGTTTGCCAT TTTTCCGAAT 
ACGCGCTTCA TTGAGCTGGT GGCAGAGATT TATCGCGTTC TAAAGCACAA CAGCCATTTT 
TATTTGTTCT GCGACCAAGA AACGATGTTT GTGATCAAGC CGCTAGCAGA AGCGGCAGGG 
TTCAAGTTCT GGAAACCCTT AGTGTGGGAC AAGTGCGCCA TTGGTATGGG GTATCACTAC 
CGCGCACGCT ATGAATTCAT TCTGTTTTTT GAAAAAGGCA AACGTAAATT ACAGGATTTA 
AGCATGCCTG ATGTGCTGCA AGAAAAGCGC GTATGGCGAG GCTATCCTAC AGAAAAGCCC 
GTGCCCTTGA TTGAAAAGCT GATTGTACAA AGCTCGAGTG AAGGTGATTT GGTTATCGAC 
CCTTTCTTTG GCTCAGGAGC GACCCTAGTG GCTGCTCAAA ATTGTAATCG AGAGTGGCAA 
GGTGCCGACT TATCACCTTC GGCACATGAG CACGCGGTTA AACGTTTAGG ATGCTAG
 
Protein sequence
MRLFQQDAVE WLQSLPANSV DLVITDPPYE SLEKHRAKGT TTRLKHSKSS SNEWFAIFPN 
TRFIELVAEI YRVLKHNSHF YLFCDQETMF VIKPLAEAAG FKFWKPLVWD KCAIGMGYHY 
RARYEFILFF EKGKRKLQDL SMPDVLQEKR VWRGYPTEKP VPLIEKLIVQ SSSEGDLVID 
PFFGSGATLV AAQNCNREWQ GADLSPSAHE HAVKRLGC