| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3279 |
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| Symbol | |
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| ID | 4175056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3937945 |
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| End bp | 3938859 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638056310 |
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| Product | hypothetical protein |
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| Protein accession | YP_662839 |
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| Protein GI | 109899584 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0523895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCCA AGGAACCGCA CTTTTGTTTG CTGCACTTTA CCTTCGCCTC GAAGGCCTGC
TTACTCTTCT TGGTAATTAG TATTCTGAAG GTGGCAAATG CATCAGACAG TCCAAGCCTC
CCTCACGCTA ATCAAGACGA TTTGCATCAG CCTAATGATG CTCGCGTCAT ATATACGGAT
GACCAGGGCG CTGCCCCTAA ACCTTTTGAA GCGGTGAATA AGCGGATACG CTTAACAACC
GGCCAAAGCT ACTTCCCTTT TATATCCGCC AAGATGCCCC ACGGTGGCTG GTCTCAAGCG
CTTGTAACAC GTACGTTTGC AGAGATGGGG CTCAATGTTG ATATACACAT TTTGCCATGG
AGTAGGGGAG AACGATGGAC TACAGAGCAA CGTTTCCTGG GGACATTTCC TTATGTCTAT
TCTGCTCAGC GGGCTAAGAA ATACTATTTT TCTAAGCCTA TCAATTTTAT CCCAGTACGT
TTCTATGTCA GCAAGGCATC GAATTTTACT GATGTACAAC AATTGAAGGA TAAACGCTTA
TGCTTACCTT ACGGCTATTC GGCCGAATTT GTGAAAGGTG GTGTAGTGGA AAGTCTCAAT
TTGAAGATTA ATCGCGTGGT TGATGGCGCC GCATGCATAG GACATGTGCA GCGGGGGTGG
AGTGACGCTG GCCTGACAAA TGACTATGTT TCTGTGAATG AGGTCAATAA TGACCGCTTA
ACAGACAGTA AGCTGGTTGT GCTTAAAAAG TATGTAGAGC AAGTGCCTTT GCATTTCATC
ATTTCAACGT CTTACCCCGA AGCGAAAATG TGGATGGATA AGTTCGATCG CGCGTTTCAA
CGTTTGATTA AAAGCGGCGC GAAAGCGGAA ATAGATAATA AGTTTATTCG ACTACTCGAC
TCAAATTCAT CCTAG
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| Protein sequence | MAAKEPHFCL LHFTFASKAC LLFLVISILK VANASDSPSL PHANQDDLHQ PNDARVIYTD
DQGAAPKPFE AVNKRIRLTT GQSYFPFISA KMPHGGWSQA LVTRTFAEMG LNVDIHILPW
SRGERWTTEQ RFLGTFPYVY SAQRAKKYYF SKPINFIPVR FYVSKASNFT DVQQLKDKRL
CLPYGYSAEF VKGGVVESLN LKINRVVDGA ACIGHVQRGW SDAGLTNDYV SVNEVNNDRL
TDSKLVVLKK YVEQVPLHFI ISTSYPEAKM WMDKFDRAFQ RLIKSGAKAE IDNKFIRLLD
SNSS
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