Gene Patl_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3210 
Symbol 
ID4174987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3854192 
End bp3855277 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content38% 
IMG OID638056241 
Producthypothetical protein 
Protein accessionYP_662770 
Protein GI109899515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAAAC GAATTTTTAT TCACATAGGG CCACCTAAAA GTGGCACCTC TGCTATTCAA 
TATGCCTTGC AGAGAAGCAG AGCATTTTTG AGTGATAGTG GTGTGTATTA TCCAGAGCAT
GAAATTGGAC CAAATGGTAT TAGCTCAGGT AATTTGACAT CAATTCTGTC AATGGATAAC
GATGGTAAGT GGGGCGTGAG TCTTGACAAA ATAACTCAAT TACTCGCCTC ATTTGAGCGC
AGTTCTGCAC ATACTTTATT ATTGAGTTCT GAGTATTTCT TCTATTTGGT TGAAGATATA
GCCGAAAAAA TACCTTCGGC AAAGTTTATT GCTTATATAA GGTGCCCTCT GGAGACATTT
GAGTCATCTT ACAATCAATC CGTTAAACGG CACAACCGAA CTTCTGAAGC TAAATTCAAT
AAAAATTTAC ACACTACGAC AATCAATATT TTGACAGAAC TAATTAATAC TGTCGGAAGA
GCTCGTTTTT TACTTCGAGC GTATTTACCT AAGAATGATG GTGGGTTTGA TCTTGTGTCG
GACTTTTCTT CTTGCTTGGA CCTTTCGTTA CCTGCACCTT TGTCAGTTAA GGAAATTACG
AACCGATCCT ATACTCTGGA AGCTTTAGAG TTTAAGCGTT GGTTAAATCA ATTCAAATTG
ACAGAGCTGG ATCCTTCTAT AGACCAAGCA CTTCAAGCTT ATAACGATGG TACGAAGTCA
TTCACTTTAT TACCGGACGA GCTGTCGCAA CGTTACCAAA AACAAGCGTT AAATAAGGTC
CGCGATTTTG TGCAGACCTA TAAAGTTCAC AATGGTCGAC GTTTAATTAA TTATCTCAAA
GTTCGTGCCA TGCCTAAGTG TGCTGAACAA TTGCTCGGTC ATCAGCAACT GGGGCAAATT
TGTAATTACT TAATGGACTC GTATCCAAAA CTTTACACCG ATATTTGCGT TAAAATATCG
CAATCAAGTA CTGCCTCAAT TAATCATAGT GAAAGGATTT CGTATGTTTT AAAAAGACAT
GTGAAATCTC AGTCTTTGTG GTTAAAAATC AAGAAGATTT TTTTAAAGAG TAATGGTCAC
GCTTAG
 
Protein sequence
MGKRIFIHIG PPKSGTSAIQ YALQRSRAFL SDSGVYYPEH EIGPNGISSG NLTSILSMDN 
DGKWGVSLDK ITQLLASFER SSAHTLLLSS EYFFYLVEDI AEKIPSAKFI AYIRCPLETF
ESSYNQSVKR HNRTSEAKFN KNLHTTTINI LTELINTVGR ARFLLRAYLP KNDGGFDLVS
DFSSCLDLSL PAPLSVKEIT NRSYTLEALE FKRWLNQFKL TELDPSIDQA LQAYNDGTKS
FTLLPDELSQ RYQKQALNKV RDFVQTYKVH NGRRLINYLK VRAMPKCAEQ LLGHQQLGQI
CNYLMDSYPK LYTDICVKIS QSSTASINHS ERISYVLKRH VKSQSLWLKI KKIFLKSNGH
A