Gene Patl_3206 details

Gene Information

• Locus tag: Patl_3206
• ID: 4174983
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 3848726
• End bp: 3849502
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638056237
• Product: glycosyltransferase
• Protein accession: YP_662766
• Protein GI: 109899511

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.623087
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAACC AGACATATAC AAACTCTCTC TTCGTCATTA TTATTGATGG GGATATCCCG 
TTGTGTCTAC GAGCACTCCT AGTTAGGAAA GGTGAAGAAC ATGACAATGT ATTCCTAATT 
CAATCCCAAA ATAATGTTGG GTTAAGCAAT TGTATGAATT TCGTAGTCGA TTGGGCATTA 
GAACATACTC CTCAAGCTAA GTTTTTTTTT AGAATGGATG CTGATGATAT CTCTATTGTG 
GATCGGTTGG CAAAACAAGT CATGTTCTTG AAAGCGAACC CAAATATTTC TATTTTGGGC 
AGTGGCCTGA CAGAAATAAA CGAGAACGGT GAAAAAGTTG GCCAACGCAA GCTCCCTCTA 
AAACACCATG AAATTATGCG TTTTTTACCT AAGCGTTGTT CTATTAATCA CCCGACAGTA 
GCAATTCGTT TTAGTGTCTT TGAGCAGGGG TTCCGGTATC GAGATGGGCT GCAGAACACG 
CAGGATTATT TCTTTTGGGC AGACCTTGCT GCTGCTGGTT ACAAGTTCGC AAACTTGCCA 
GATAGGCTTT TACAGTTTAG GCGGGTTAAC GATTTCTACA AGCGCAGAGG CTATAGCAAA 
TCGTTAAACG AGTTTAAAGC GCGCTTTTAC ACAATGAAGG TATTGAAGCG CTATGGTGTT 
GGCAATATCG TTTATGCATG TAGCGTATTA GTATTACGGT TAATGCCAGC GAAACTTGTT 
AAGCTAGCGT ATAAAATAGA CCGTTACCTT TTAAACAAGC GAGTTAAACA CGAGTGA 

 

Protein sequence

MVNQTYTNSL FVIIIDGDIP LCLRALLVRK GEEHDNVFLI QSQNNVGLSN CMNFVVDWAL 
EHTPQAKFFF RMDADDISIV DRLAKQVMFL KANPNISILG SGLTEINENG EKVGQRKLPL 
KHHEIMRFLP KRCSINHPTV AIRFSVFEQG FRYRDGLQNT QDYFFWADLA AAGYKFANLP 
DRLLQFRRVN DFYKRRGYSK SLNEFKARFY TMKVLKRYGV GNIVYACSVL VLRLMPAKLV 
KLAYKIDRYL LNKRVKHE