Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3203 |
Symbol | |
ID | 4174980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3844805 |
End bp | 3845548 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638056234 |
Product | hypothetical protein |
Protein accession | YP_662763 |
Protein GI | 109899508 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.248312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGA AATATAAATC GATATTGTTC GCAGCGATTA CCAGTTTTAG CTGTGTAACG AGTGCGAACG TCACCATAAA ATGGAATGAA GTTGACTACA CTTTCGACTC CACCGTCCGT TTAACTGATG TCCTTTCTAA ATTAGATTTG AACACTAATA TTTATTGGCC ATCAGCTGCT TTATTTATCC CTAATGATGT CACTCTTGAG CGAGCGCGGC GGTCCTCGTT AAGTAATCTT AATATTCTTG CTAGTCATTT GCCAAGTGAT ACTCACGAAC AAAAAAGCGT CTTCACAAAT TTAATCAATG AACTTGAACA TTGGCATTTG GCCAATCGCC TATCCGTTAA GATTGATTAT GACTTAGCCC GTATCTCTGA GGCTCACAAC CCGCAGTTTG ATAACGGCTA TTATGTTGTA AGTCTACATG AGCGCCAAGA ATCAGTAGAA ATAATTGGCG CTGTAACTAA TACCGTAGAG ACAAAGCACT TACCTCATAC TGATGTGAGT GAATATCTGA ACAGTGCGAA TATTGCATCT TTTGCCAATA GAGACACCGT TATAATCATA CAAGCAGATG GACGAATAAT AGAAGCCCCG ACAGCTTACT GGAACCGACA ACACCAAGAA GTCATGCCCG GCAGCATCAT TTATGTTCCA TTTAAAGAAT CATTGTTTAC ACCTCAATAC AAAGAATTGA ATCAATTAAT TGTGACGTTA GCCAAAAACA GGCTACACAA ATGA
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Protein sequence | MIKKYKSILF AAITSFSCVT SANVTIKWNE VDYTFDSTVR LTDVLSKLDL NTNIYWPSAA LFIPNDVTLE RARRSSLSNL NILASHLPSD THEQKSVFTN LINELEHWHL ANRLSVKIDY DLARISEAHN PQFDNGYYVV SLHERQESVE IIGAVTNTVE TKHLPHTDVS EYLNSANIAS FANRDTVIII QADGRIIEAP TAYWNRQHQE VMPGSIIYVP FKESLFTPQY KELNQLIVTL AKNRLHK
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