| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3187 |
|---|
| Symbol | |
|---|
| ID | 4174964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 3830901 |
|---|
| End bp | 3831206 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638056218 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_662747 |
|---|
| Protein GI | 109899492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.207132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGT TTGATTTGAC CTTATTTCTG GTGATCTTAT TGGTGGTATT TCAGTTTTGG
CGCATGCGAG CCATTACTGA AAAGGCTAAC CAATATCTCG CTCAGTATTG TGATAAGCAT
GGCTTGCAAC TAATCAGCAA TGCACGGCAT AAAACCCGCT TGGGTAGTTA CAGAGGAAAG
CTCGATTGGC AAAGTTGCTT CGTATTTGAA TTTTCAGGTA ATGGTGAAAA CAGTTATCAA
GGCACGCTTA CTATGGCCGG AAAGCACATT CTAAACGTTG ATACTCCTGC TTATCGAGTA
GATTAA
|
|---|
| Protein sequence | MNLFDLTLFL VILLVVFQFW RMRAITEKAN QYLAQYCDKH GLQLISNARH KTRLGSYRGK
LDWQSCFVFE FSGNGENSYQ GTLTMAGKHI LNVDTPAYRV D
|
|---|
| |