| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3107 |
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| Symbol | |
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| ID | 4174879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3739147 |
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| End bp | 3740253 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056133 |
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| Product | putative lipoprotein |
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| Protein accession | YP_662667 |
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| Protein GI | 109899412 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.126191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCCAATAC CAACCAATGC AGCGTGGTTC GAGGCGACGG GTCAAGCAGT TATCAATAAC
GGCAATAAGG CCTTAGCCAA AAAACAGGCC ACTCAAGAGG CCGTTAAACA GGCATTAATG
TTTGCGGGCG CATCCATTAC CAGTGTACAG GCGATGTCAA ATGGCTTACT AGAAAATGAC
CGGTTCGAAA TCCGCAGTGG CGGTGAGGTC AATGACTTAG CTTTGATCAG TGAAACTTAC
CACGATGATT ATGTGACCAT CGTCATTCGC GCAGACATCT TTGCCCAAAG AACACAATGT
GATGCAGCGC AGTATAAAAA GCGCTTGGTC AGCACTTGGT TCCCTATTCG AGACCGCCAG
CAAGGAATCA CTGGCGGGTT AACAGAATTT GGCCAAACGG TCAGTGAGCT CTTTGAACAA
CAGTTTAACC AGACCAGTCG TTTCGCCCGT ATGACTCAGC GCCAACCTTA CTATTTATCA
CCACAAAGCC CTGACATACA AAGCGATATC ATCACGCTTG CTCGTCAAAC TGATAATCAA
TATGTATTGA TTGGGGAAAT CACCGAGTTA TCCGTAGAGC GCTCGTCCCG TAACGCGCTG
CTATTTTGGC AGGACGCGCC ATTGTCTCGG AATTTTCGTT TAGAGCTATC TCTATACGAC
GGCAACAACG CTTCTTTACT CAAGCAAGAA CGCATGGCTA TTAACACGCC GTGGGAATTC
GAACTACACC AACAGGTCAG CCCATCTAGT CGGCAGTTAT GGCAGTCGCA ATTTGGCCAA
GCCGTGACAG CAACCATCAC CGAACAAGCG TCATTGATAG ATGAAGCCTT AGACTGCCTA
CCTACTTACG CTCGTGTTTT ACAGGTCAGT AACGAGCAAC TCACCATTAA CATTGGCAAA
CAAGATGGTG TACAGATTGG TGACGAGTTA ACCCTTTTCA AACATGCCCA ATTTGTGGAT
GCCATCGGTA ACCTTCATCA ACAATTACAG CTTCATCCAA ATCAAGTAAA AGTGATGCAA
GTATACAATG AAACCGCAGT GTTAACGTCG ACCTCAAGTG CCCCACTGGC TAACATTCAG
CCAAACGATT TCGTTGCACG TCAGTAG
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| Protein sequence | MPIPTNAAWF EATGQAVINN GNKALAKKQA TQEAVKQALM FAGASITSVQ AMSNGLLEND
RFEIRSGGEV NDLALISETY HDDYVTIVIR ADIFAQRTQC DAAQYKKRLV STWFPIRDRQ
QGITGGLTEF GQTVSELFEQ QFNQTSRFAR MTQRQPYYLS PQSPDIQSDI ITLARQTDNQ
YVLIGEITEL SVERSSRNAL LFWQDAPLSR NFRLELSLYD GNNASLLKQE RMAINTPWEF
ELHQQVSPSS RQLWQSQFGQ AVTATITEQA SLIDEALDCL PTYARVLQVS NEQLTINIGK
QDGVQIGDEL TLFKHAQFVD AIGNLHQQLQ LHPNQVKVMQ VYNETAVLTS TSSAPLANIQ
PNDFVARQ
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