Gene Patl_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3104 
Symbol 
ID4174876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3737242 
End bp3737568 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content39% 
IMG OID638056130 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_662664 
Protein GI109899409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.534727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTA ACAACATTAA CAACAATGGT CAAAAGCAAG TTATTGATAA CCAAAAAGTT 
AATCAACAAC AAACGCAAAA CCAACAAGCG AATGAAGCTG CTGTAAAGAG CACGTCTTCG
CAACCTGTGC GTCAAGATTC TGTTTCGTTA ACTCAATCTG CACAGCAATT AGCCCAAGTG
CAGAAGAAAA GCGCCGAAGC GCCAGTGAAT CAGGAAAAAG TTGATCGTTT AAAGAAAGCG
ATTCAAAGTG GCGAGTACAG TGTAAATCCT GATAGTTTAG CGAAAAATAT TGCATTGCAA
GAATCAGAAA TATTTGGCAG AAACTAG
 
Protein sequence
MSINNINNNG QKQVIDNQKV NQQQTQNQQA NEAAVKSTSS QPVRQDSVSL TQSAQQLAQV 
QKKSAEAPVN QEKVDRLKKA IQSGEYSVNP DSLAKNIALQ ESEIFGRN